==1679685== Memcheck, a memory error detector ==1679685== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1679685== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1679685== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==1679685== Parent PID: 1664931 ==1679685== ==1679685== ==1679685== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1679685== Open file descriptor 12: ==1679685== at 0xF04522D: pipe (pipe.c:29) ==1679685== by 0x18A7507D: ??? ==1679685== by 0x1407C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1679685== by 0x10946418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1679685== by 0x108DFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1679685== by 0xF5D6D38: PetscInitialize (pinit.c:924) ==1679685== by 0xE864FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1679685== by 0xE86501D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1679685== by 0x13596A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1679685== by 0x1304FB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1679685== by 0x133180: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1679685== by 0x133020: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1679685== by 0x1336B7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1679685== by 0x12E7F5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==1679685== ==1679685== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1679685== at 0xF049BCC: __open_nocancel (open64_nocancel.c:39) ==1679685== by 0xEFCDC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1679685== by 0xE899822: ??? ==1679685== by 0xE89996F: ??? ==1679685== by 0x141216DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1679685== by 0x14121938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1679685== by 0x140D7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1679685== by 0x1407C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1679685== by 0x10946418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1679685== by 0x108DFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1679685== by 0xF5D6D38: PetscInitialize (pinit.c:924) ==1679685== by 0xE864FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1679685== by 0xE86501D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1679685== by 0x13596A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1679685== by 0x1304FB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1679685== by 0x133180: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1679685== by 0x133020: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1679685== by 0x1336B7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1679685== by 0x12E7F5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==1679685== ==1679685== Open file descriptor 114: ==1679685== ==1679685== ==1679685== Open file descriptor 110: ==1679685== ==1679685== ==1679685== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPdes_valgrind.txt ==1679685== ==1679685== ==1679685== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1679685== ==1679685== ==1679685== ==1679685== HEAP SUMMARY: ==1679685== in use at exit: 700,759 bytes in 9,378 blocks ==1679685== total heap usage: 2,374,148 allocs, 2,364,770 frees, 1,794,485,268 bytes allocated ==1679685== ==1679685== LEAK SUMMARY: ==1679685== definitely lost: 0 bytes in 0 blocks ==1679685== indirectly lost: 0 bytes in 0 blocks ==1679685== possibly lost: 0 bytes in 0 blocks ==1679685== still reachable: 56 bytes in 3 blocks ==1679685== suppressed: 700,703 bytes in 9,375 blocks ==1679685== Reachable blocks (those to which a pointer was found) are not shown. ==1679685== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1679685== ==1679685== For lists of detected and suppressed errors, rerun with: -s ==1679685== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)