==1679707== Memcheck, a memory error detector ==1679707== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1679707== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1679707== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1679707== Parent PID: 1664931 ==1679707== ==1679707== ==1679707== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1679707== Open file descriptor 12: ==1679707== at 0xECEB22D: pipe (pipe.c:29) ==1679707== by 0x18A7607D: ??? ==1679707== by 0x1407F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1679707== by 0x10946418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1679707== by 0x108DFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1679707== by 0xF5D6D38: PetscInitialize (pinit.c:924) ==1679707== by 0xE4C8FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1679707== by 0xE4C901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1679707== by 0x1D6A0A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1679707== by 0x1CE2E9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1679707== by 0x1D1B68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1679707== by 0x1D1A08: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1679707== by 0x1D209F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1679707== by 0x1CC5D5: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==1679707== ==1679707== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1679707== at 0xECEFBCC: __open_nocancel (open64_nocancel.c:39) ==1679707== by 0xEC73C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1679707== by 0xE4FD822: ??? ==1679707== by 0xE4FD96F: ??? ==1679707== by 0x141246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1679707== by 0x14124938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1679707== by 0x140DA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1679707== by 0x1407F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1679707== by 0x10946418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1679707== by 0x108DFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1679707== by 0xF5D6D38: PetscInitialize (pinit.c:924) ==1679707== by 0xE4C8FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1679707== by 0xE4C901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1679707== by 0x1D6A0A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1679707== by 0x1CE2E9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1679707== by 0x1D1B68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1679707== by 0x1D1A08: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1679707== by 0x1D209F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1679707== by 0x1CC5D5: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==1679707== ==1679707== Open file descriptor 114: ==1679707== ==1679707== ==1679707== Open file descriptor 110: ==1679707== ==1679707== ==1679707== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPottsBasedCellPopulation_valgrind.txt ==1679707== ==1679707== ==1679707== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1679707== ==1679707== ==1679707== ==1679707== HEAP SUMMARY: ==1679707== in use at exit: 700,704 bytes in 9,375 blocks ==1679707== total heap usage: 11,683,926 allocs, 11,674,551 frees, 2,223,638,556 bytes allocated ==1679707== ==1679707== LEAK SUMMARY: ==1679707== definitely lost: 0 bytes in 0 blocks ==1679707== indirectly lost: 0 bytes in 0 blocks ==1679707== possibly lost: 0 bytes in 0 blocks ==1679707== still reachable: 72 bytes in 4 blocks ==1679707== suppressed: 700,632 bytes in 9,371 blocks ==1679707== Reachable blocks (those to which a pointer was found) are not shown. ==1679707== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1679707== ==1679707== For lists of detected and suppressed errors, rerun with: -s ==1679707== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)