==1666673== Memcheck, a memory error detector ==1666673== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1666673== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1666673== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsUpdateRules -malloc_debug -malloc_dump -memory_info ==1666673== Parent PID: 1664931 ==1666673== ==1666673== ==1666673== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1666673== Open file descriptor 12: ==1666673== at 0xE80122D: pipe (pipe.c:29) ==1666673== by 0x18A7507D: ??? ==1666673== by 0x12FC64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1666673== by 0xE10B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1666673== by 0xE0A4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1666673== by 0xCD9BD38: PetscInitialize (pinit.c:924) ==1666673== by 0xCC0EFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1666673== by 0xCC0F01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1666673== by 0x133017: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1666673== by 0x12BA95: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1666673== by 0x12E816: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1666673== by 0x12E6B6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1666673== by 0x12ED4D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1666673== by 0x129DC5: main (TestPottsUpdateRules.cpp:19) ==1666673== ==1666673== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1666673== at 0xE805BCC: __open_nocancel (open64_nocancel.c:39) ==1666673== by 0xE789C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1666673== by 0xCC43822: ??? ==1666673== by 0xCC4396F: ??? ==1666673== by 0x1306B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1666673== by 0x1306B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1666673== by 0x13021922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1666673== by 0x12FC62DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1666673== by 0xE10B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1666673== by 0xE0A4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1666673== by 0xCD9BD38: PetscInitialize (pinit.c:924) ==1666673== by 0xCC0EFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1666673== by 0xCC0F01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1666673== by 0x133017: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1666673== by 0x12BA95: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1666673== by 0x12E816: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1666673== by 0x12E6B6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1666673== by 0x12ED4D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1666673== by 0x129DC5: main (TestPottsUpdateRules.cpp:19) ==1666673== ==1666673== Open file descriptor 114: ==1666673== ==1666673== ==1666673== Open file descriptor 110: ==1666673== ==1666673== ==1666673== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsUpdateRules_valgrind.txt ==1666673== ==1666673== ==1666673== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1666673== ==1666673== ==1666673== ==1666673== HEAP SUMMARY: ==1666673== in use at exit: 700,759 bytes in 9,378 blocks ==1666673== total heap usage: 69,272 allocs, 59,894 frees, 1,355,013,358 bytes allocated ==1666673== ==1666673== LEAK SUMMARY: ==1666673== definitely lost: 0 bytes in 0 blocks ==1666673== indirectly lost: 0 bytes in 0 blocks ==1666673== possibly lost: 0 bytes in 0 blocks ==1666673== still reachable: 56 bytes in 3 blocks ==1666673== suppressed: 700,703 bytes in 9,375 blocks ==1666673== Reachable blocks (those to which a pointer was found) are not shown. ==1666673== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1666673== ==1666673== For lists of detected and suppressed errors, rerun with: -s ==1666673== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)