==1680420== Memcheck, a memory error detector ==1680420== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1680420== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1680420== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningPottsBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==1680420== Parent PID: 1664931 ==1680420== ==1680420== ==1680420== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1680420== Open file descriptor 12: ==1680420== at 0xD30822D: pipe (pipe.c:29) ==1680420== by 0x18A7607D: ??? ==1680420== by 0x140794CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1680420== by 0x1085F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1680420== by 0x107F8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1680420== by 0xF4EFD38: PetscInitialize (pinit.c:924) ==1680420== by 0xCC0EFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1680420== by 0xCC0F01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1680420== by 0x1238AC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1680420== by 0x11EDC5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1680420== by 0x1213E6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1680420== by 0x121286: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1680420== by 0x12191D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1680420== by 0x11D0F5: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==1680420== ==1680420== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1680420== at 0xD30CBCC: __open_nocancel (open64_nocancel.c:39) ==1680420== by 0xD290C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1680420== by 0xCC43822: ??? ==1680420== by 0xCC4396F: ??? ==1680420== by 0x1411E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1680420== by 0x1411E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1680420== by 0x140D4922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1680420== by 0x140792DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1680420== by 0x1085F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1680420== by 0x107F8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1680420== by 0xF4EFD38: PetscInitialize (pinit.c:924) ==1680420== by 0xCC0EFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1680420== by 0xCC0F01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1680420== by 0x1238AC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1680420== by 0x11EDC5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1680420== by 0x1213E6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1680420== by 0x121286: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1680420== by 0x12191D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1680420== by 0x11D0F5: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==1680420== ==1680420== Open file descriptor 114: ==1680420== ==1680420== ==1680420== Open file descriptor 110: ==1680420== ==1680420== ==1680420== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningPottsBasedSimulationsTutorial_valgrind.txt ==1680420== ==1680420== ==1680420== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1680420== ==1680420== ==1680420== ==1680420== HEAP SUMMARY: ==1680420== in use at exit: 700,688 bytes in 9,374 blocks ==1680420== total heap usage: 40,688,663 allocs, 40,679,289 frees, 3,845,555,511 bytes allocated ==1680420== ==1680420== LEAK SUMMARY: ==1680420== definitely lost: 0 bytes in 0 blocks ==1680420== indirectly lost: 0 bytes in 0 blocks ==1680420== possibly lost: 0 bytes in 0 blocks ==1680420== still reachable: 56 bytes in 3 blocks ==1680420== suppressed: 700,632 bytes in 9,371 blocks ==1680420== Reachable blocks (those to which a pointer was found) are not shown. ==1680420== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1680420== ==1680420== For lists of detected and suppressed errors, rerun with: -s ==1680420== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)