==1680678== Memcheck, a memory error detector ==1680678== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1680678== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1680678== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVertexBasedCellPopulationForCrypt -malloc_debug -malloc_dump -memory_info ==1680678== Parent PID: 1664931 ==1680678== ==1680678== ==1680678== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1680678== Open file descriptor 12: ==1680678== at 0x1193722D: pipe (pipe.c:29) ==1680678== by 0x1A73607D: ??? ==1680678== by 0x1589A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1680678== by 0x11241418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1680678== by 0x111DAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1680678== by 0xFEB1D38: PetscInitialize (pinit.c:924) ==1680678== by 0xFD88FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1680678== by 0xFD8901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1680678== by 0x11D973: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1680678== by 0x119153: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1680678== by 0x11B54C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1680678== by 0x11B447: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1680678== by 0x11BA5B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1680678== by 0x117955: main (TestVertexBasedCellPopulationForCrypt.cpp:18) ==1680678== ==1680678== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1680678== at 0x1193BBCC: __open_nocancel (open64_nocancel.c:39) ==1680678== by 0x118BFC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1680678== by 0x1113B822: ??? ==1680678== by 0x1113B96F: ??? ==1680678== by 0x1593F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1680678== by 0x1593F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1680678== by 0x158F5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1680678== by 0x1589A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1680678== by 0x11241418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1680678== by 0x111DAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1680678== by 0xFEB1D38: PetscInitialize (pinit.c:924) ==1680678== by 0xFD88FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1680678== by 0xFD8901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1680678== by 0x11D973: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1680678== by 0x119153: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1680678== by 0x11B54C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1680678== by 0x11B447: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1680678== by 0x11BA5B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1680678== by 0x117955: main (TestVertexBasedCellPopulationForCrypt.cpp:18) ==1680678== ==1680678== Open file descriptor 114: ==1680678== ==1680678== ==1680678== Open file descriptor 110: ==1680678== ==1680678== ==1680678== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexBasedCellPopulationForCrypt_valgrind.txt ==1680678== ==1680678== ==1680678== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1680678== ==1680678== ==1680678== ==1680678== HEAP SUMMARY: ==1680678== in use at exit: 700,855 bytes in 9,379 blocks ==1680678== total heap usage: 55,676 allocs, 46,297 frees, 1,353,999,872 bytes allocated ==1680678== ==1680678== LEAK SUMMARY: ==1680678== definitely lost: 0 bytes in 0 blocks ==1680678== indirectly lost: 0 bytes in 0 blocks ==1680678== possibly lost: 0 bytes in 0 blocks ==1680678== still reachable: 136 bytes in 4 blocks ==1680678== suppressed: 700,719 bytes in 9,375 blocks ==1680678== Reachable blocks (those to which a pointer was found) are not shown. ==1680678== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1680678== ==1680678== For lists of detected and suppressed errors, rerun with: -s ==1680678== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)