==1735729== Memcheck, a memory error detector ==1735729== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1735729== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1735729== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==1735729== Parent PID: 1721043 ==1735729== ==1735729== ==1735729== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1735729== Open file descriptor 12: ==1735729== at 0xEFD422D: pipe (pipe.c:29) ==1735729== by 0x18A0407D: ??? ==1735729== by 0x140074CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1735729== by 0x108D5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1735729== by 0x1086ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1735729== by 0xF565D38: PetscInitialize (pinit.c:924) ==1735729== by 0xE7F3FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1735729== by 0xE7F401D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1735729== by 0x13596A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1735729== by 0x1304FB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1735729== by 0x133180: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1735729== by 0x133020: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1735729== by 0x1336B7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1735729== by 0x12E7F5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==1735729== ==1735729== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1735729== at 0xEFD8BCC: __open_nocancel (open64_nocancel.c:39) ==1735729== by 0xEF5CC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1735729== by 0xE828822: ??? ==1735729== by 0xE82896F: ??? ==1735729== by 0x140AC6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1735729== by 0x140AC938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1735729== by 0x14062922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1735729== by 0x140072DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1735729== by 0x108D5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1735729== by 0x1086ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1735729== by 0xF565D38: PetscInitialize (pinit.c:924) ==1735729== by 0xE7F3FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1735729== by 0xE7F401D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1735729== by 0x13596A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1735729== by 0x1304FB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1735729== by 0x133180: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1735729== by 0x133020: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1735729== by 0x1336B7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1735729== by 0x12E7F5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==1735729== ==1735729== Open file descriptor 114: ==1735729== ==1735729== ==1735729== Open file descriptor 110: ==1735729== ==1735729== ==1735729== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPdes_valgrind.txt ==1735729== ==1735729== ==1735729== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1735729== ==1735729== ==1735729== ==1735729== HEAP SUMMARY: ==1735729== in use at exit: 700,759 bytes in 9,378 blocks ==1735729== total heap usage: 2,374,120 allocs, 2,364,742 frees, 1,794,483,266 bytes allocated ==1735729== ==1735729== LEAK SUMMARY: ==1735729== definitely lost: 0 bytes in 0 blocks ==1735729== indirectly lost: 0 bytes in 0 blocks ==1735729== possibly lost: 0 bytes in 0 blocks ==1735729== still reachable: 56 bytes in 3 blocks ==1735729== suppressed: 700,703 bytes in 9,375 blocks ==1735729== Reachable blocks (those to which a pointer was found) are not shown. ==1735729== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1735729== ==1735729== For lists of detected and suppressed errors, rerun with: -s ==1735729== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)