==1735862== Memcheck, a memory error detector ==1735862== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1735862== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1735862== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1735862== Parent PID: 1721043 ==1735862== ==1735862== ==1735862== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1735862== Open file descriptor 12: ==1735862== at 0xEC7A22D: pipe (pipe.c:29) ==1735862== by 0x18A0507D: ??? ==1735862== by 0x140084CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1735862== by 0x108D5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1735862== by 0x1086ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1735862== by 0xF565D38: PetscInitialize (pinit.c:924) ==1735862== by 0xE457FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1735862== by 0xE45801D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1735862== by 0x1D6A0A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1735862== by 0x1CE2E9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1735862== by 0x1D1B68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1735862== by 0x1D1A08: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1735862== by 0x1D209F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1735862== by 0x1CC5D5: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==1735862== ==1735862== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1735862== at 0xEC7EBCC: __open_nocancel (open64_nocancel.c:39) ==1735862== by 0xEC02C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1735862== by 0xE48C822: ??? ==1735862== by 0xE48C96F: ??? ==1735862== by 0x140AD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1735862== by 0x140AD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1735862== by 0x14063922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1735862== by 0x140082DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1735862== by 0x108D5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1735862== by 0x1086ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1735862== by 0xF565D38: PetscInitialize (pinit.c:924) ==1735862== by 0xE457FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1735862== by 0xE45801D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1735862== by 0x1D6A0A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1735862== by 0x1CE2E9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1735862== by 0x1D1B68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1735862== by 0x1D1A08: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1735862== by 0x1D209F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1735862== by 0x1CC5D5: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==1735862== ==1735862== Open file descriptor 114: ==1735862== ==1735862== ==1735862== Open file descriptor 110: ==1735862== ==1735862== ==1735862== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPottsBasedCellPopulation_valgrind.txt ==1735862== ==1735862== ==1735862== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1735862== ==1735862== ==1735862== ==1735862== HEAP SUMMARY: ==1735862== in use at exit: 700,704 bytes in 9,375 blocks ==1735862== total heap usage: 11,683,894 allocs, 11,674,519 frees, 2,223,636,353 bytes allocated ==1735862== ==1735862== LEAK SUMMARY: ==1735862== definitely lost: 0 bytes in 0 blocks ==1735862== indirectly lost: 0 bytes in 0 blocks ==1735862== possibly lost: 0 bytes in 0 blocks ==1735862== still reachable: 72 bytes in 4 blocks ==1735862== suppressed: 700,632 bytes in 9,371 blocks ==1735862== Reachable blocks (those to which a pointer was found) are not shown. ==1735862== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1735862== ==1735862== For lists of detected and suppressed errors, rerun with: -s ==1735862== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)