==1736459== Memcheck, a memory error detector ==1736459== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1736459== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1736459== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningMeshBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==1736459== Parent PID: 1721043 ==1736459== ==1736459== ==1736459== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1736459== Open file descriptor 12: ==1736459== at 0x1000622D: pipe (pipe.c:29) ==1736459== by 0x18A0507D: ??? ==1736459== by 0x13F684CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1736459== by 0xF910418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1736459== by 0xF8A9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1736459== by 0xE580D38: PetscInitialize (pinit.c:924) ==1736459== by 0xE457FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1736459== by 0xE45801D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1736459== by 0x1213E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1736459== by 0x11C9C5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1736459== by 0x11EFB4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1736459== by 0x11EE54: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1736459== by 0x11F4EB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1736459== by 0x11ACF5: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==1736459== ==1736459== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1736459== at 0x1000ABCC: __open_nocancel (open64_nocancel.c:39) ==1736459== by 0xFF8EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1736459== by 0xF80A822: ??? ==1736459== by 0xF80A96F: ??? ==1736459== by 0x1400D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1736459== by 0x1400D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1736459== by 0x13FC3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1736459== by 0x13F682DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1736459== by 0xF910418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1736459== by 0xF8A9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1736459== by 0xE580D38: PetscInitialize (pinit.c:924) ==1736459== by 0xE457FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1736459== by 0xE45801D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1736459== by 0x1213E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1736459== by 0x11C9C5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1736459== by 0x11EFB4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1736459== by 0x11EE54: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1736459== by 0x11F4EB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1736459== by 0x11ACF5: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==1736459== ==1736459== Open file descriptor 114: ==1736459== ==1736459== ==1736459== Open file descriptor 110: ==1736459== ==1736459== ==1736459== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedSimulationsTutorial_valgrind.txt ==1736459== ==1736459== ==1736459== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1736459== ==1736459== ==1736459== ==1736459== HEAP SUMMARY: ==1736459== in use at exit: 700,688 bytes in 9,374 blocks ==1736459== total heap usage: 3,339,542 allocs, 3,330,168 frees, 2,282,270,708 bytes allocated ==1736459== ==1736459== LEAK SUMMARY: ==1736459== definitely lost: 0 bytes in 0 blocks ==1736459== indirectly lost: 0 bytes in 0 blocks ==1736459== possibly lost: 0 bytes in 0 blocks ==1736459== still reachable: 56 bytes in 3 blocks ==1736459== suppressed: 700,632 bytes in 9,371 blocks ==1736459== Reachable blocks (those to which a pointer was found) are not shown. ==1736459== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1736459== ==1736459== For lists of detected and suppressed errors, rerun with: -s ==1736459== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)