==1737243== Memcheck, a memory error detector ==1737243== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1737243== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1737243== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningVertexBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==1737243== Parent PID: 1721043 ==1737243== ==1737243== ==1737243== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1737243== Open file descriptor 12: ==1737243== at 0x118C622D: pipe (pipe.c:29) ==1737243== by 0x1A6C507D: ??? ==1737243== by 0x1582B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1737243== by 0x111D0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1737243== by 0x11169D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1737243== by 0xFE40D38: PetscInitialize (pinit.c:924) ==1737243== by 0xFD17FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1737243== by 0xFD1801D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1737243== by 0x11FDE3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1737243== by 0x11B653: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1737243== by 0x11D8EE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1737243== by 0x11D7EA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1737243== by 0x11DDFD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1737243== by 0x119E55: main (TestRunningVertexBasedCryptSimulationsTutorial.cpp:18) ==1737243== ==1737243== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1737243== at 0x118CABCC: __open_nocancel (open64_nocancel.c:39) ==1737243== by 0x1184EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1737243== by 0x110CA822: ??? ==1737243== by 0x110CA96F: ??? ==1737243== by 0x158D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1737243== by 0x158D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1737243== by 0x15886922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1737243== by 0x1582B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1737243== by 0x111D0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1737243== by 0x11169D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1737243== by 0xFE40D38: PetscInitialize (pinit.c:924) ==1737243== by 0xFD17FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1737243== by 0xFD1801D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1737243== by 0x11FDE3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1737243== by 0x11B653: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1737243== by 0x11D8EE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1737243== by 0x11D7EA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1737243== by 0x11DDFD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1737243== by 0x119E55: main (TestRunningVertexBasedCryptSimulationsTutorial.cpp:18) ==1737243== ==1737243== Open file descriptor 114: ==1737243== ==1737243== ==1737243== Open file descriptor 110: ==1737243== ==1737243== ==1737243== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningVertexBasedCryptSimulationsTutorial_valgrind.txt ==1737243== ==1737243== ==1737243== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1737243== ==1737243== ==1737243== ==1737243== HEAP SUMMARY: ==1737243== in use at exit: 700,855 bytes in 9,379 blocks ==1737243== total heap usage: 1,620,552 allocs, 1,611,173 frees, 1,473,828,945 bytes allocated ==1737243== ==1737243== LEAK SUMMARY: ==1737243== definitely lost: 0 bytes in 0 blocks ==1737243== indirectly lost: 0 bytes in 0 blocks ==1737243== possibly lost: 0 bytes in 0 blocks ==1737243== still reachable: 136 bytes in 4 blocks ==1737243== suppressed: 700,719 bytes in 9,375 blocks ==1737243== Reachable blocks (those to which a pointer was found) are not shown. ==1737243== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1737243== ==1737243== For lists of detected and suppressed errors, rerun with: -s ==1737243== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)