==42636== Memcheck, a memory error detector ==42636== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42636== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42636== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==42636== Parent PID: 41049 ==42636== ==42636== ==42636== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42636== Open file descriptor 12: ==42636== at 0xD34A22D: pipe (pipe.c:29) ==42636== by 0x18A7607D: ??? ==42636== by 0x140794CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42636== by 0x1085F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42636== by 0x107F8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42636== by 0xF4EFD38: PetscInitialize (pinit.c:924) ==42636== by 0xCC0EFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42636== by 0xCC0F01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42636== by 0x132B96: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42636== by 0x12BE63: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42636== by 0x12E9B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42636== by 0x12E8B3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42636== by 0x12EEC7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42636== by 0x12A665: main (TestCaUpdateRules.cpp:18) ==42636== ==42636== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42636== at 0xD34EBCC: __open_nocancel (open64_nocancel.c:39) ==42636== by 0xD2D2C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42636== by 0xCC43822: ??? ==42636== by 0xCC4396F: ??? ==42636== by 0x1411E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42636== by 0x1411E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42636== by 0x140D4922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42636== by 0x140792DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42636== by 0x1085F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42636== by 0x107F8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42636== by 0xF4EFD38: PetscInitialize (pinit.c:924) ==42636== by 0xCC0EFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42636== by 0xCC0F01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42636== by 0x132B96: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42636== by 0x12BE63: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42636== by 0x12E9B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42636== by 0x12E8B3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42636== by 0x12EEC7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42636== by 0x12A665: main (TestCaUpdateRules.cpp:18) ==42636== ==42636== Open file descriptor 112: ==42636== ==42636== ==42636== Open file descriptor 109: ==42636== ==42636== ==42636== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==42636== ==42636== ==42636== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42636== ==42636== ==42636== ==42636== HEAP SUMMARY: ==42636== in use at exit: 700,749 bytes in 9,378 blocks ==42636== total heap usage: 57,511 allocs, 48,133 frees, 1,354,221,490 bytes allocated ==42636== ==42636== LEAK SUMMARY: ==42636== definitely lost: 0 bytes in 0 blocks ==42636== indirectly lost: 0 bytes in 0 blocks ==42636== possibly lost: 0 bytes in 0 blocks ==42636== still reachable: 56 bytes in 3 blocks ==42636== suppressed: 700,693 bytes in 9,375 blocks ==42636== Reachable blocks (those to which a pointer was found) are not shown. ==42636== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42636== ==42636== For lists of detected and suppressed errors, rerun with: -s ==42636== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)