==42190== Memcheck, a memory error detector ==42190== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42190== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42190== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCell -malloc_debug -malloc_dump -memory_info ==42190== Parent PID: 41049 ==42190== ==42190== ==42190== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42190== Open file descriptor 12: ==42190== at 0xE47822D: pipe (pipe.c:29) ==42190== by 0x18A7507D: ??? ==42190== by 0x12FC64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42190== by 0xE0C9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42190== by 0xE062D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42190== by 0xCD39D38: PetscInitialize (pinit.c:924) ==42190== by 0xCC0EFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42190== by 0xCC0F01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42190== by 0x129313: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==42190== by 0x124005: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42190== by 0x126EE2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42190== by 0x126D82: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42190== by 0x127419: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42190== by 0x122335: main (TestCell.cpp:19) ==42190== ==42190== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42190== at 0xE47CBCC: __open_nocancel (open64_nocancel.c:39) ==42190== by 0xE400C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42190== by 0xDFC3822: ??? ==42190== by 0xDFC396F: ??? ==42190== by 0x1306B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42190== by 0x1306B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42190== by 0x13021922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42190== by 0x12FC62DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42190== by 0xE0C9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42190== by 0xE062D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42190== by 0xCD39D38: PetscInitialize (pinit.c:924) ==42190== by 0xCC0EFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42190== by 0xCC0F01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42190== by 0x129313: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==42190== by 0x124005: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42190== by 0x126EE2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42190== by 0x126D82: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42190== by 0x127419: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42190== by 0x122335: main (TestCell.cpp:19) ==42190== ==42190== Open file descriptor 112: ==42190== ==42190== ==42190== Open file descriptor 109: ==42190== ==42190== ==42190== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCell_valgrind.txt ==42190== ==42190== ==42190== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42190== ==42190== ==42190== ==42190== HEAP SUMMARY: ==42190== in use at exit: 700,812 bytes in 9,375 blocks ==42190== total heap usage: 5,185,288 allocs, 5,175,913 frees, 1,834,137,208 bytes allocated ==42190== ==42190== LEAK SUMMARY: ==42190== definitely lost: 0 bytes in 0 blocks ==42190== indirectly lost: 0 bytes in 0 blocks ==42190== possibly lost: 0 bytes in 0 blocks ==42190== still reachable: 184 bytes in 4 blocks ==42190== suppressed: 700,628 bytes in 9,371 blocks ==42190== Reachable blocks (those to which a pointer was found) are not shown. ==42190== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42190== ==42190== For lists of detected and suppressed errors, rerun with: -s ==42190== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)