==56851== Memcheck, a memory error detector ==56851== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==56851== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==56851== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==56851== Parent PID: 41049 ==56851== ==56851== ==56851== FILE DESCRIPTORS: 9 open (3 std) at exit. ==56851== Open file descriptor 12: ==56851== at 0x105AB22D: pipe (pipe.c:29) ==56851== by 0x1A73707D: ??? ==56851== by 0x1593D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==56851== by 0x12206418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==56851== by 0x1219FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==56851== by 0x10E96D38: PetscInitialize (pinit.c:924) ==56851== by 0xFD88FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==56851== by 0xFD8901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==56851== by 0x23B7F2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==56851== by 0x2319C9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==56851== by 0x2360FA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==56851== by 0x235F9A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==56851== by 0x236631: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==56851== by 0x22FCB5: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==56851== ==56851== Open file descriptor 8: /dev/shm/open_mpi.0000 ==56851== at 0x105AFBCC: __open_nocancel (open64_nocancel.c:39) ==56851== by 0x10533C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==56851== by 0xFDBD822: ??? ==56851== by 0xFDBD96F: ??? ==56851== by 0x159E26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==56851== by 0x159E2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==56851== by 0x15998922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==56851== by 0x1593D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==56851== by 0x12206418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==56851== by 0x1219FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==56851== by 0x10E96D38: PetscInitialize (pinit.c:924) ==56851== by 0xFD88FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==56851== by 0xFD8901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==56851== by 0x23B7F2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==56851== by 0x2319C9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==56851== by 0x2360FA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==56851== by 0x235F9A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==56851== by 0x236631: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==56851== by 0x22FCB5: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==56851== ==56851== Open file descriptor 112: ==56851== ==56851== ==56851== Open file descriptor 109: ==56851== ==56851== ==56851== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==56851== ==56851== ==56851== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==56851== ==56851== ==56851== ==56851== HEAP SUMMARY: ==56851== in use at exit: 700,700 bytes in 9,374 blocks ==56851== total heap usage: 6,309,743 allocs, 6,300,369 frees, 2,072,725,117 bytes allocated ==56851== ==56851== LEAK SUMMARY: ==56851== definitely lost: 0 bytes in 0 blocks ==56851== indirectly lost: 0 bytes in 0 blocks ==56851== possibly lost: 0 bytes in 0 blocks ==56851== still reachable: 56 bytes in 3 blocks ==56851== suppressed: 700,644 bytes in 9,371 blocks ==56851== Reachable blocks (those to which a pointer was found) are not shown. ==56851== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==56851== ==56851== For lists of detected and suppressed errors, rerun with: -s ==56851== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)