==56648== Memcheck, a memory error detector ==56648== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==56648== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==56648== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOdeBasedCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==56648== Parent PID: 41049 ==56648== ==56648== ==56648== FILE DESCRIPTORS: 9 open (3 std) at exit. ==56648== Open file descriptor 12: ==56648== at 0x1030422D: pipe (pipe.c:29) ==56648== by 0x1A73807D: ??? ==56648== by 0x148D94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==56648== by 0xFC0E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==56648== by 0xFBA7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==56648== by 0xE89ED38: PetscInitialize (pinit.c:924) ==56648== by 0xE713FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==56648== by 0xE71401D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==56648== by 0x193453: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==56648== by 0x18B18B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==56648== by 0x18E788: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==56648== by 0x18E628: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==56648== by 0x18ECBF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==56648== by 0x186F75: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==56648== ==56648== Open file descriptor 8: /dev/shm/open_mpi.0000 ==56648== at 0x10308BCC: __open_nocancel (open64_nocancel.c:39) ==56648== by 0x1028CC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==56648== by 0xE748822: ??? ==56648== by 0xE74896F: ??? ==56648== by 0x1497E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==56648== by 0x1497E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==56648== by 0x14934922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==56648== by 0x148D92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==56648== by 0xFC0E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==56648== by 0xFBA7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==56648== by 0xE89ED38: PetscInitialize (pinit.c:924) ==56648== by 0xE713FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==56648== by 0xE71401D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==56648== by 0x193453: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==56648== by 0x18B18B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==56648== by 0x18E788: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==56648== by 0x18E628: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==56648== by 0x18ECBF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==56648== by 0x186F75: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==56648== ==56648== Open file descriptor 112: ==56648== ==56648== ==56648== Open file descriptor 109: ==56648== ==56648== ==56648== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModelsForCrypt_valgrind.txt ==56648== ==56648== ==56648== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==56648== ==56648== ==56648== ==56648== HEAP SUMMARY: ==56648== in use at exit: 700,829 bytes in 9,379 blocks ==56648== total heap usage: 863,788 allocs, 854,409 frees, 1,475,951,124 bytes allocated ==56648== ==56648== LEAK SUMMARY: ==56648== definitely lost: 0 bytes in 0 blocks ==56648== indirectly lost: 0 bytes in 0 blocks ==56648== possibly lost: 0 bytes in 0 blocks ==56648== still reachable: 120 bytes in 4 blocks ==56648== suppressed: 700,709 bytes in 9,375 blocks ==56648== Reachable blocks (those to which a pointer was found) are not shown. ==56648== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==56648== ==56648== For lists of detected and suppressed errors, rerun with: -s ==56648== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)