==43300== Memcheck, a memory error detector ==43300== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==43300== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==43300== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==43300== Parent PID: 41049 ==43300== ==43300== ==43300== FILE DESCRIPTORS: 9 open (3 std) at exit. ==43300== Open file descriptor 12: ==43300== at 0xF08722D: pipe (pipe.c:29) ==43300== by 0x18A7507D: ??? ==43300== by 0x1407C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43300== by 0x10946418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43300== by 0x108DFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43300== by 0xF5D6D38: PetscInitialize (pinit.c:924) ==43300== by 0xE864FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43300== by 0xE86501D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43300== by 0x22567C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43300== by 0x21ECFF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43300== by 0x22286A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43300== by 0x22270A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43300== by 0x222DA1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43300== by 0x21CFB5: main (TestOffLatticeSimulationWithPdes.cpp:19) ==43300== ==43300== Open file descriptor 8: /dev/shm/open_mpi.0000 ==43300== at 0xF08BBCC: __open_nocancel (open64_nocancel.c:39) ==43300== by 0xF00FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==43300== by 0xE899822: ??? ==43300== by 0xE89996F: ??? ==43300== by 0x141216DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43300== by 0x14121938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43300== by 0x140D7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43300== by 0x1407C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43300== by 0x10946418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43300== by 0x108DFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43300== by 0xF5D6D38: PetscInitialize (pinit.c:924) ==43300== by 0xE864FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43300== by 0xE86501D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43300== by 0x22567C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43300== by 0x21ECFF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43300== by 0x22286A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43300== by 0x22270A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43300== by 0x222DA1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43300== by 0x21CFB5: main (TestOffLatticeSimulationWithPdes.cpp:19) ==43300== ==43300== Open file descriptor 112: ==43300== ==43300== ==43300== Open file descriptor 109: ==43300== ==43300== ==43300== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==43300== ==43300== ==43300== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==43300== ==43300== ==43300== ==43300== HEAP SUMMARY: ==43300== in use at exit: 700,684 bytes in 9,374 blocks ==43300== total heap usage: 7,509,442 allocs, 7,500,068 frees, 2,662,254,417 bytes allocated ==43300== ==43300== LEAK SUMMARY: ==43300== definitely lost: 0 bytes in 0 blocks ==43300== indirectly lost: 0 bytes in 0 blocks ==43300== possibly lost: 0 bytes in 0 blocks ==43300== still reachable: 56 bytes in 3 blocks ==43300== suppressed: 700,628 bytes in 9,371 blocks ==43300== Reachable blocks (those to which a pointer was found) are not shown. ==43300== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==43300== ==43300== For lists of detected and suppressed errors, rerun with: -s ==43300== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)