==55788== Memcheck, a memory error detector ==55788== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==55788== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==55788== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==55788== Parent PID: 41049 ==55788== ==55788== ==55788== FILE DESCRIPTORS: 9 open (3 std) at exit. ==55788== Open file descriptor 12: ==55788== at 0xF04522D: pipe (pipe.c:29) ==55788== by 0x18A7507D: ??? ==55788== by 0x1407C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==55788== by 0x10946418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==55788== by 0x108DFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==55788== by 0xF5D6D38: PetscInitialize (pinit.c:924) ==55788== by 0xE864FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==55788== by 0xE86501D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==55788== by 0x13596A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==55788== by 0x1304FB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==55788== by 0x133180: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==55788== by 0x133020: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==55788== by 0x1336B7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==55788== by 0x12E7F5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==55788== ==55788== Open file descriptor 8: /dev/shm/open_mpi.0000 ==55788== at 0xF049BCC: __open_nocancel (open64_nocancel.c:39) ==55788== by 0xEFCDC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==55788== by 0xE899822: ??? ==55788== by 0xE89996F: ??? ==55788== by 0x141216DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==55788== by 0x14121938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==55788== by 0x140D7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==55788== by 0x1407C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==55788== by 0x10946418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==55788== by 0x108DFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==55788== by 0xF5D6D38: PetscInitialize (pinit.c:924) ==55788== by 0xE864FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==55788== by 0xE86501D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==55788== by 0x13596A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==55788== by 0x1304FB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==55788== by 0x133180: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==55788== by 0x133020: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==55788== by 0x1336B7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==55788== by 0x12E7F5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==55788== ==55788== Open file descriptor 112: ==55788== ==55788== ==55788== Open file descriptor 109: ==55788== ==55788== ==55788== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPdes_valgrind.txt ==55788== ==55788== ==55788== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==55788== ==55788== ==55788== ==55788== HEAP SUMMARY: ==55788== in use at exit: 700,749 bytes in 9,378 blocks ==55788== total heap usage: 2,374,145 allocs, 2,364,767 frees, 1,794,485,060 bytes allocated ==55788== ==55788== LEAK SUMMARY: ==55788== definitely lost: 0 bytes in 0 blocks ==55788== indirectly lost: 0 bytes in 0 blocks ==55788== possibly lost: 0 bytes in 0 blocks ==55788== still reachable: 56 bytes in 3 blocks ==55788== suppressed: 700,693 bytes in 9,375 blocks ==55788== Reachable blocks (those to which a pointer was found) are not shown. ==55788== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==55788== ==55788== For lists of detected and suppressed errors, rerun with: -s ==55788== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)