==98928== Memcheck, a memory error detector ==98928== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==98928== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==98928== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==98928== Parent PID: 97252 ==98928== ==98928== ==98928== FILE DESCRIPTORS: 9 open (3 std) at exit. ==98928== Open file descriptor 12: ==98928== at 0xECEB22D: pipe (pipe.c:29) ==98928== by 0x18A7607D: ??? ==98928== by 0x1407F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==98928== by 0x10946418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==98928== by 0x108DFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==98928== by 0xF5D6D38: PetscInitialize (pinit.c:924) ==98928== by 0xE4C8FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==98928== by 0xE4C901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==98928== by 0x2EFE54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==98928== by 0x2E65C9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==98928== by 0x2EAECE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==98928== by 0x2EAD6E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==98928== by 0x2EB405: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==98928== by 0x2E48B5: main (TestMeshBasedCellPopulation.cpp:19) ==98928== ==98928== Open file descriptor 8: /dev/shm/open_mpi.0000 ==98928== at 0xECEFBCC: __open_nocancel (open64_nocancel.c:39) ==98928== by 0xEC73C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==98928== by 0xE4FD822: ??? ==98928== by 0xE4FD96F: ??? ==98928== by 0x141246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==98928== by 0x14124938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==98928== by 0x140DA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==98928== by 0x1407F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==98928== by 0x10946418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==98928== by 0x108DFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==98928== by 0xF5D6D38: PetscInitialize (pinit.c:924) ==98928== by 0xE4C8FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==98928== by 0xE4C901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==98928== by 0x2EFE54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==98928== by 0x2E65C9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==98928== by 0x2EAECE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==98928== by 0x2EAD6E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==98928== by 0x2EB405: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==98928== by 0x2E48B5: main (TestMeshBasedCellPopulation.cpp:19) ==98928== ==98928== Open file descriptor 112: ==98928== ==98928== ==98928== Open file descriptor 109: ==98928== ==98928== ==98928== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulation_valgrind.txt ==98928== ==98928== ==98928== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==98928== ==98928== ==98928== ==98928== HEAP SUMMARY: ==98928== in use at exit: 700,749 bytes in 9,378 blocks ==98928== total heap usage: 146,968 allocs, 137,590 frees, 1,381,687,616 bytes allocated ==98928== ==98928== LEAK SUMMARY: ==98928== definitely lost: 0 bytes in 0 blocks ==98928== indirectly lost: 0 bytes in 0 blocks ==98928== possibly lost: 0 bytes in 0 blocks ==98928== still reachable: 56 bytes in 3 blocks ==98928== suppressed: 700,693 bytes in 9,375 blocks ==98928== Reachable blocks (those to which a pointer was found) are not shown. ==98928== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==98928== ==98928== For lists of detected and suppressed errors, rerun with: -s ==98928== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)