==99452== Memcheck, a memory error detector ==99452== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==99452== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==99452== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d -malloc_debug -malloc_dump -memory_info ==99452== Parent PID: 97252 ==99452== ==99452== ==99452== FILE DESCRIPTORS: 9 open (3 std) at exit. ==99452== Open file descriptor 12: ==99452== at 0xECA722D: pipe (pipe.c:29) ==99452== by 0x18A7607D: ??? ==99452== by 0x1407F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==99452== by 0x10946418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==99452== by 0x108DFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==99452== by 0xF5D6D38: PetscInitialize (pinit.c:924) ==99452== by 0xE4C8FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==99452== by 0xE4C901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==99452== by 0x13287A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==99452== by 0x12D833: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==99452== by 0x12FFEC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==99452== by 0x12FEE7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==99452== by 0x1304FB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==99452== by 0x12C035: main (TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d.cpp:18) ==99452== ==99452== Open file descriptor 8: /dev/shm/open_mpi.0000 ==99452== at 0xECABBCC: __open_nocancel (open64_nocancel.c:39) ==99452== by 0xEC2FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==99452== by 0xE4FD822: ??? ==99452== by 0xE4FD96F: ??? ==99452== by 0x141246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==99452== by 0x14124938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==99452== by 0x140DA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==99452== by 0x1407F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==99452== by 0x10946418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==99452== by 0x108DFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==99452== by 0xF5D6D38: PetscInitialize (pinit.c:924) ==99452== by 0xE4C8FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==99452== by 0xE4C901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==99452== by 0x13287A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==99452== by 0x12D833: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==99452== by 0x12FFEC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==99452== by 0x12FEE7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==99452== by 0x1304FB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==99452== by 0x12C035: main (TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d.cpp:18) ==99452== ==99452== Open file descriptor 112: ==99452== ==99452== ==99452== Open file descriptor 109: ==99452== ==99452== ==99452== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d_valgrind.txt ==99452== ==99452== ==99452== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==99452== ==99452== ==99452== ==99452== HEAP SUMMARY: ==99452== in use at exit: 700,684 bytes in 9,374 blocks ==99452== total heap usage: 6,678,157 allocs, 6,668,783 frees, 9,011,158,656 bytes allocated ==99452== ==99452== LEAK SUMMARY: ==99452== definitely lost: 0 bytes in 0 blocks ==99452== indirectly lost: 0 bytes in 0 blocks ==99452== possibly lost: 0 bytes in 0 blocks ==99452== still reachable: 56 bytes in 3 blocks ==99452== suppressed: 700,628 bytes in 9,371 blocks ==99452== Reachable blocks (those to which a pointer was found) are not shown. ==99452== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==99452== ==99452== For lists of detected and suppressed errors, rerun with: -s ==99452== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)