==99635== Memcheck, a memory error detector ==99635== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==99635== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==99635== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==99635== Parent PID: 97252 ==99635== ==99635== ==99635== FILE DESCRIPTORS: 9 open (3 std) at exit. ==99635== Open file descriptor 12: ==99635== at 0x101A022D: pipe (pipe.c:29) ==99635== by 0x18A7607D: ??? ==99635== by 0x13FE14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==99635== by 0xF9C3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==99635== by 0xF95CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==99635== by 0xE653D38: PetscInitialize (pinit.c:924) ==99635== by 0xE4C8FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==99635== by 0xE4C901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==99635== by 0x20005B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==99635== by 0x1F9C29: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==99635== by 0x1FD594: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==99635== by 0x1FD434: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==99635== by 0x1FDACB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==99635== by 0x1F7F15: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==99635== ==99635== Open file descriptor 8: /dev/shm/open_mpi.0000 ==99635== at 0x101A4BCC: __open_nocancel (open64_nocancel.c:39) ==99635== by 0x10128C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==99635== by 0xE4FD822: ??? ==99635== by 0xE4FD96F: ??? ==99635== by 0x140866DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==99635== by 0x14086938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==99635== by 0x1403C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==99635== by 0x13FE12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==99635== by 0xF9C3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==99635== by 0xF95CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==99635== by 0xE653D38: PetscInitialize (pinit.c:924) ==99635== by 0xE4C8FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==99635== by 0xE4C901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==99635== by 0x20005B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==99635== by 0x1F9C29: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==99635== by 0x1FD594: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==99635== by 0x1FD434: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==99635== by 0x1FDACB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==99635== by 0x1F7F15: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==99635== ==99635== Open file descriptor 112: ==99635== ==99635== ==99635== Open file descriptor 109: ==99635== ==99635== ==99635== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithVertexBasedCellPopulation_valgrind.txt ==99635== ==99635== ==99635== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==99635== ==99635== ==99635== ==99635== HEAP SUMMARY: ==99635== in use at exit: 700,684 bytes in 9,374 blocks ==99635== total heap usage: 9,745,104 allocs, 9,735,730 frees, 2,617,404,145 bytes allocated ==99635== ==99635== LEAK SUMMARY: ==99635== definitely lost: 0 bytes in 0 blocks ==99635== indirectly lost: 0 bytes in 0 blocks ==99635== possibly lost: 0 bytes in 0 blocks ==99635== still reachable: 56 bytes in 3 blocks ==99635== suppressed: 700,628 bytes in 9,371 blocks ==99635== Reachable blocks (those to which a pointer was found) are not shown. ==99635== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==99635== ==99635== For lists of detected and suppressed errors, rerun with: -s ==99635== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)