==98991== Memcheck, a memory error detector ==98991== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==98991== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==98991== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPeriodicNodeBasedCellPopulationParallelMethods -malloc_debug -malloc_dump -memory_info ==98991== Parent PID: 97252 ==98991== ==98991== ==98991== FILE DESCRIPTORS: 9 open (3 std) at exit. ==98991== Open file descriptor 12: ==98991== at 0xECA722D: pipe (pipe.c:29) ==98991== by 0x18A7607D: ??? ==98991== by 0x1407F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==98991== by 0x10946418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==98991== by 0x108DFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==98991== by 0xF5D6D38: PetscInitialize (pinit.c:924) ==98991== by 0xE4C8FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==98991== by 0xE4C901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==98991== by 0x12B4EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==98991== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==98991== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==98991== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==98991== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==98991== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==98991== ==98991== Open file descriptor 8: /dev/shm/open_mpi.0000 ==98991== at 0xECABBCC: __open_nocancel (open64_nocancel.c:39) ==98991== by 0xEC2FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==98991== by 0xE4FD822: ??? ==98991== by 0xE4FD96F: ??? ==98991== by 0x141246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==98991== by 0x14124938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==98991== by 0x140DA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==98991== by 0x1407F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==98991== by 0x10946418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==98991== by 0x108DFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==98991== by 0xF5D6D38: PetscInitialize (pinit.c:924) ==98991== by 0xE4C8FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==98991== by 0xE4C901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==98991== by 0x12B4EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==98991== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==98991== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==98991== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==98991== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==98991== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==98991== ==98991== Open file descriptor 112: ==98991== ==98991== ==98991== Open file descriptor 109: ==98991== ==98991== ==98991== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPeriodicNodeBasedCellPopulationParallelMethods_valgrind.txt ==98991== ==98991== ==98991== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==98991== ==98991== ==98991== ==98991== HEAP SUMMARY: ==98991== in use at exit: 700,749 bytes in 9,378 blocks ==98991== total heap usage: 54,850 allocs, 45,472 frees, 1,353,938,865 bytes allocated ==98991== ==98991== LEAK SUMMARY: ==98991== definitely lost: 0 bytes in 0 blocks ==98991== indirectly lost: 0 bytes in 0 blocks ==98991== possibly lost: 0 bytes in 0 blocks ==98991== still reachable: 56 bytes in 3 blocks ==98991== suppressed: 700,693 bytes in 9,375 blocks ==98991== Reachable blocks (those to which a pointer was found) are not shown. ==98991== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==98991== ==98991== For lists of detected and suppressed errors, rerun with: -s ==98991== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)