==168910== Memcheck, a memory error detector ==168910== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==168910== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==168910== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningMeshBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==168910== Parent PID: 153476 ==168910== ==168910== ==168910== FILE DESCRIPTORS: 9 open (3 std) at exit. ==168910== Open file descriptor 12: ==168910== at 0x1007722D: pipe (pipe.c:29) ==168910== by 0x18A7607D: ??? ==168910== by 0x13FE14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==168910== by 0xF981418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==168910== by 0xF91AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==168910== by 0xE5F1D38: PetscInitialize (pinit.c:924) ==168910== by 0xE4C8FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==168910== by 0xE4C901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==168910== by 0x1213E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==168910== by 0x11C9C5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==168910== by 0x11EFB4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==168910== by 0x11EE54: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==168910== by 0x11F4EB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==168910== by 0x11ACF5: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==168910== ==168910== Open file descriptor 8: /dev/shm/open_mpi.0000 ==168910== at 0x1007BBCC: __open_nocancel (open64_nocancel.c:39) ==168910== by 0xFFFFC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==168910== by 0xF87B822: ??? ==168910== by 0xF87B96F: ??? ==168910== by 0x140866DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==168910== by 0x14086938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==168910== by 0x1403C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==168910== by 0x13FE12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==168910== by 0xF981418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==168910== by 0xF91AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==168910== by 0xE5F1D38: PetscInitialize (pinit.c:924) ==168910== by 0xE4C8FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==168910== by 0xE4C901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==168910== by 0x1213E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==168910== by 0x11C9C5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==168910== by 0x11EFB4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==168910== by 0x11EE54: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==168910== by 0x11F4EB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==168910== by 0x11ACF5: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==168910== ==168910== Open file descriptor 112: ==168910== ==168910== ==168910== Open file descriptor 109: ==168910== ==168910== ==168910== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedSimulationsTutorial_valgrind.txt ==168910== ==168910== ==168910== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==168910== ==168910== ==168910== ==168910== HEAP SUMMARY: ==168910== in use at exit: 700,686 bytes in 9,374 blocks ==168910== total heap usage: 3,339,569 allocs, 3,330,195 frees, 2,282,273,032 bytes allocated ==168910== ==168910== LEAK SUMMARY: ==168910== definitely lost: 0 bytes in 0 blocks ==168910== indirectly lost: 0 bytes in 0 blocks ==168910== possibly lost: 0 bytes in 0 blocks ==168910== still reachable: 56 bytes in 3 blocks ==168910== suppressed: 700,630 bytes in 9,371 blocks ==168910== Reachable blocks (those to which a pointer was found) are not shown. ==168910== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==168910== ==168910== For lists of detected and suppressed errors, rerun with: -s ==168910== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)