==211385== Memcheck, a memory error detector ==211385== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==211385== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==211385== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithParticles -malloc_debug -malloc_dump -memory_info ==211385== Parent PID: 209663 ==211385== ==211385== ==211385== FILE DESCRIPTORS: 9 open (3 std) at exit. ==211385== Open file descriptor 12: ==211385== at 0xECEB22D: pipe (pipe.c:29) ==211385== by 0x18A7607D: ??? ==211385== by 0x1407F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==211385== by 0x10946418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==211385== by 0x108DFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==211385== by 0xF5D6D38: PetscInitialize (pinit.c:924) ==211385== by 0xE4C8FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==211385== by 0xE4C901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==211385== by 0x2E2FB4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==211385== by 0x2D9569: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==211385== by 0x2DDF34: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==211385== by 0x2DDDD4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==211385== by 0x2DE46B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==211385== by 0x2D7855: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==211385== ==211385== Open file descriptor 8: /dev/shm/open_mpi.0000 ==211385== at 0xECEFBCC: __open_nocancel (open64_nocancel.c:39) ==211385== by 0xEC73C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==211385== by 0xE4FD822: ??? ==211385== by 0xE4FD96F: ??? ==211385== by 0x141246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==211385== by 0x14124938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==211385== by 0x140DA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==211385== by 0x1407F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==211385== by 0x10946418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==211385== by 0x108DFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==211385== by 0xF5D6D38: PetscInitialize (pinit.c:924) ==211385== by 0xE4C8FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==211385== by 0xE4C901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==211385== by 0x2E2FB4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==211385== by 0x2D9569: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==211385== by 0x2DDF34: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==211385== by 0x2DDDD4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==211385== by 0x2DE46B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==211385== by 0x2D7855: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==211385== ==211385== Open file descriptor 112: ==211385== ==211385== ==211385== Open file descriptor 109: ==211385== ==211385== ==211385== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithParticles_valgrind.txt ==211385== ==211385== ==211385== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==211385== ==211385== ==211385== ==211385== HEAP SUMMARY: ==211385== in use at exit: 700,754 bytes in 9,378 blocks ==211385== total heap usage: 105,346 allocs, 95,968 frees, 1,361,246,752 bytes allocated ==211385== ==211385== LEAK SUMMARY: ==211385== definitely lost: 0 bytes in 0 blocks ==211385== indirectly lost: 0 bytes in 0 blocks ==211385== possibly lost: 0 bytes in 0 blocks ==211385== still reachable: 56 bytes in 3 blocks ==211385== suppressed: 700,698 bytes in 9,375 blocks ==211385== Reachable blocks (those to which a pointer was found) are not shown. ==211385== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==211385== ==211385== For lists of detected and suppressed errors, rerun with: -s ==211385== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)