==225168== Memcheck, a memory error detector ==225168== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==225168== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==225168== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningTumourSpheroidSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==225168== Parent PID: 209663 ==225168== ==225168== ==225168== FILE DESCRIPTORS: 9 open (3 std) at exit. ==225168== Open file descriptor 12: ==225168== at 0xEF5C22D: pipe (pipe.c:29) ==225168== by 0x18A7507D: ??? ==225168== by 0x1407C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==225168== by 0x1085F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==225168== by 0x107F8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==225168== by 0xF4EDD38: PetscInitialize (pinit.c:924) ==225168== by 0xE864FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==225168== by 0xE86501D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==225168== by 0x11BA32: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==225168== by 0x117353: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==225168== by 0x11963E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==225168== by 0x119539: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==225168== by 0x119B4D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==225168== by 0x115B55: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==225168== ==225168== Open file descriptor 8: /dev/shm/open_mpi.0000 ==225168== at 0xEF60BCC: __open_nocancel (open64_nocancel.c:39) ==225168== by 0xEEE4C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==225168== by 0xE899822: ??? ==225168== by 0xE89996F: ??? ==225168== by 0x141216DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==225168== by 0x14121938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==225168== by 0x140D7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==225168== by 0x1407C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==225168== by 0x1085F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==225168== by 0x107F8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==225168== by 0xF4EDD38: PetscInitialize (pinit.c:924) ==225168== by 0xE864FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==225168== by 0xE86501D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==225168== by 0x11BA32: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==225168== by 0x117353: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==225168== by 0x11963E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==225168== by 0x119539: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==225168== by 0x119B4D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==225168== by 0x115B55: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==225168== ==225168== Open file descriptor 112: ==225168== ==225168== ==225168== Open file descriptor 109: ==225168== ==225168== ==225168== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningTumourSpheroidSimulationsTutorial_valgrind.txt ==225168== ==225168== ==225168== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==225168== ==225168== ==225168== ==225168== HEAP SUMMARY: ==225168== in use at exit: 700,754 bytes in 9,378 blocks ==225168== total heap usage: 2,085,972 allocs, 2,076,594 frees, 1,689,939,537 bytes allocated ==225168== ==225168== LEAK SUMMARY: ==225168== definitely lost: 0 bytes in 0 blocks ==225168== indirectly lost: 0 bytes in 0 blocks ==225168== possibly lost: 0 bytes in 0 blocks ==225168== still reachable: 56 bytes in 3 blocks ==225168== suppressed: 700,698 bytes in 9,375 blocks ==225168== Reachable blocks (those to which a pointer was found) are not shown. ==225168== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==225168== ==225168== For lists of detected and suppressed errors, rerun with: -s ==225168== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 38 from 38)