==269061== Memcheck, a memory error detector ==269061== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==269061== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==269061== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithParticles -malloc_debug -malloc_dump -memory_info ==269061== Parent PID: 267336 ==269061== ==269061== ==269061== FILE DESCRIPTORS: 9 open (3 std) at exit. ==269061== Open file descriptor 12: ==269061== at 0xECEC22D: pipe (pipe.c:29) ==269061== by 0x18A7607D: ??? ==269061== by 0x1407F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==269061== by 0x10947418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==269061== by 0x108E0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==269061== by 0xF5D7D38: PetscInitialize (pinit.c:924) ==269061== by 0xE4C9FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==269061== by 0xE4CA01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==269061== by 0x2E2FB4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==269061== by 0x2D9569: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==269061== by 0x2DDF34: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==269061== by 0x2DDDD4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==269061== by 0x2DE46B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==269061== by 0x2D7855: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==269061== ==269061== Open file descriptor 8: /dev/shm/open_mpi.0000 ==269061== at 0xECF0BCC: __open_nocancel (open64_nocancel.c:39) ==269061== by 0xEC74C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==269061== by 0xE4FE822: ??? ==269061== by 0xE4FE96F: ??? ==269061== by 0x141246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==269061== by 0x14124938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==269061== by 0x140DA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==269061== by 0x1407F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==269061== by 0x10947418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==269061== by 0x108E0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==269061== by 0xF5D7D38: PetscInitialize (pinit.c:924) ==269061== by 0xE4C9FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==269061== by 0xE4CA01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==269061== by 0x2E2FB4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==269061== by 0x2D9569: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==269061== by 0x2DDF34: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==269061== by 0x2DDDD4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==269061== by 0x2DE46B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==269061== by 0x2D7855: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==269061== ==269061== Open file descriptor 114: ==269061== ==269061== ==269061== Open file descriptor 110: ==269061== ==269061== ==269061== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithParticles_valgrind.txt ==269061== ==269061== ==269061== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==269061== ==269061== ==269061== ==269061== HEAP SUMMARY: ==269061== in use at exit: 700,754 bytes in 9,378 blocks ==269061== total heap usage: 105,347 allocs, 95,969 frees, 1,361,247,122 bytes allocated ==269061== ==269061== LEAK SUMMARY: ==269061== definitely lost: 0 bytes in 0 blocks ==269061== indirectly lost: 0 bytes in 0 blocks ==269061== possibly lost: 0 bytes in 0 blocks ==269061== still reachable: 56 bytes in 3 blocks ==269061== suppressed: 700,698 bytes in 9,375 blocks ==269061== Reachable blocks (those to which a pointer was found) are not shown. ==269061== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==269061== ==269061== For lists of detected and suppressed errors, rerun with: -s ==269061== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)