==269639== Memcheck, a memory error detector ==269639== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==269639== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==269639== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==269639== Parent PID: 267336 ==269639== ==269639== ==269639== FILE DESCRIPTORS: 9 open (3 std) at exit. ==269639== Open file descriptor 12: ==269639== at 0x101A122D: pipe (pipe.c:29) ==269639== by 0x18A7607D: ??? ==269639== by 0x13FE14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==269639== by 0xF9C4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==269639== by 0xF95DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==269639== by 0xE654D38: PetscInitialize (pinit.c:924) ==269639== by 0xE4C9FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==269639== by 0xE4CA01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==269639== by 0x20005B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==269639== by 0x1F9C29: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==269639== by 0x1FD594: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==269639== by 0x1FD434: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==269639== by 0x1FDACB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==269639== by 0x1F7F15: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==269639== ==269639== Open file descriptor 8: /dev/shm/open_mpi.0000 ==269639== at 0x101A5BCC: __open_nocancel (open64_nocancel.c:39) ==269639== by 0x10129C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==269639== by 0xE4FE822: ??? ==269639== by 0xE4FE96F: ??? ==269639== by 0x140866DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==269639== by 0x14086938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==269639== by 0x1403C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==269639== by 0x13FE12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==269639== by 0xF9C4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==269639== by 0xF95DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==269639== by 0xE654D38: PetscInitialize (pinit.c:924) ==269639== by 0xE4C9FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==269639== by 0xE4CA01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==269639== by 0x20005B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==269639== by 0x1F9C29: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==269639== by 0x1FD594: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==269639== by 0x1FD434: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==269639== by 0x1FDACB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==269639== by 0x1F7F15: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==269639== ==269639== Open file descriptor 114: ==269639== ==269639== ==269639== Open file descriptor 110: ==269639== ==269639== ==269639== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithVertexBasedCellPopulation_valgrind.txt ==269639== ==269639== ==269639== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==269639== ==269639== ==269639== ==269639== HEAP SUMMARY: ==269639== in use at exit: 700,686 bytes in 9,374 blocks ==269639== total heap usage: 9,745,106 allocs, 9,735,732 frees, 2,617,404,080 bytes allocated ==269639== ==269639== LEAK SUMMARY: ==269639== definitely lost: 0 bytes in 0 blocks ==269639== indirectly lost: 0 bytes in 0 blocks ==269639== possibly lost: 0 bytes in 0 blocks ==269639== still reachable: 56 bytes in 3 blocks ==269639== suppressed: 700,630 bytes in 9,371 blocks ==269639== Reachable blocks (those to which a pointer was found) are not shown. ==269639== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==269639== ==269639== For lists of detected and suppressed errors, rerun with: -s ==269639== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)