==325940== Memcheck, a memory error detector ==325940== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==325940== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==325940== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/Test2dVertexBasedSimulationWithSrnModels -malloc_debug -malloc_dump -memory_info ==325940== Parent PID: 324030 ==325940== ==325940== ==325940== FILE DESCRIPTORS: 9 open (3 std) at exit. ==325940== Open file descriptor 12: ==325940== at 0xEBC122D: pipe (pipe.c:29) ==325940== by 0x18A7607D: ??? ==325940== by 0x1407F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==325940== by 0x10860418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==325940== by 0x107F9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==325940== by 0xF4F0D38: PetscInitialize (pinit.c:924) ==325940== by 0xE4C9FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==325940== by 0xE4CA01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==325940== by 0x122316: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==325940== by 0x11DA85: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==325940== by 0x11FE74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==325940== by 0x11FD14: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==325940== by 0x1203AB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==325940== by 0x11BDB5: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==325940== ==325940== Open file descriptor 8: /dev/shm/open_mpi.0000 ==325940== at 0xEBC5BCC: __open_nocancel (open64_nocancel.c:39) ==325940== by 0xEB49C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==325940== by 0xE4FE822: ??? ==325940== by 0xE4FE96F: ??? ==325940== by 0x141246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==325940== by 0x14124938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==325940== by 0x140DA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==325940== by 0x1407F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==325940== by 0x10860418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==325940== by 0x107F9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==325940== by 0xF4F0D38: PetscInitialize (pinit.c:924) ==325940== by 0xE4C9FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==325940== by 0xE4CA01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==325940== by 0x122316: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==325940== by 0x11DA85: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==325940== by 0x11FE74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==325940== by 0x11FD14: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==325940== by 0x1203AB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==325940== by 0x11BDB5: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==325940== ==325940== Open file descriptor 114: ==325940== ==325940== ==325940== Open file descriptor 110: ==325940== ==325940== ==325940== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test2dVertexBasedSimulationWithSrnModels_valgrind.txt ==325940== ==325940== ==325940== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==325940== ==325940== ==325940== ==325940== HEAP SUMMARY: ==325940== in use at exit: 700,754 bytes in 9,378 blocks ==325940== total heap usage: 1,126,576 allocs, 1,117,198 frees, 1,431,031,457 bytes allocated ==325940== ==325940== LEAK SUMMARY: ==325940== definitely lost: 0 bytes in 0 blocks ==325940== indirectly lost: 0 bytes in 0 blocks ==325940== possibly lost: 0 bytes in 0 blocks ==325940== still reachable: 56 bytes in 3 blocks ==325940== suppressed: 700,698 bytes in 9,375 blocks ==325940== Reachable blocks (those to which a pointer was found) are not shown. ==325940== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==325940== ==325940== For lists of detected and suppressed errors, rerun with: -s ==325940== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)