==326135== Memcheck, a memory error detector ==326135== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==326135== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==326135== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation3d -malloc_debug -malloc_dump -memory_info ==326135== Parent PID: 324030 ==326135== ==326135== ==326135== FILE DESCRIPTORS: 9 open (3 std) at exit. ==326135== Open file descriptor 12: ==326135== at 0x101A122D: pipe (pipe.c:29) ==326135== by 0x18A7607D: ??? ==326135== by 0x13FE14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==326135== by 0xF9C4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==326135== by 0xF95DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==326135== by 0xE654D38: PetscInitialize (pinit.c:924) ==326135== by 0xE4C9FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==326135== by 0xE4CA01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==326135== by 0x1FF521: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==326135== by 0x1F9497: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==326135== by 0x1FC7AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==326135== by 0x1FC6A8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==326135== by 0x1FCCBB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==326135== by 0x1F7C55: main (TestOffLatticeSimulation3d.cpp:18) ==326135== ==326135== Open file descriptor 8: /dev/shm/open_mpi.0000 ==326135== at 0x101A5BCC: __open_nocancel (open64_nocancel.c:39) ==326135== by 0x10129C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==326135== by 0xE4FE822: ??? ==326135== by 0xE4FE96F: ??? ==326135== by 0x140866DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==326135== by 0x14086938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==326135== by 0x1403C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==326135== by 0x13FE12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==326135== by 0xF9C4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==326135== by 0xF95DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==326135== by 0xE654D38: PetscInitialize (pinit.c:924) ==326135== by 0xE4C9FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==326135== by 0xE4CA01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==326135== by 0x1FF521: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==326135== by 0x1F9497: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==326135== by 0x1FC7AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==326135== by 0x1FC6A8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==326135== by 0x1FCCBB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==326135== by 0x1F7C55: main (TestOffLatticeSimulation3d.cpp:18) ==326135== ==326135== Open file descriptor 114: ==326135== ==326135== ==326135== Open file descriptor 110: ==326135== ==326135== ==326135== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation3d_valgrind.txt ==326135== ==326135== ==326135== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==326135== ==326135== ==326135== ==326135== HEAP SUMMARY: ==326135== in use at exit: 700,754 bytes in 9,378 blocks ==326135== total heap usage: 856,209 allocs, 846,831 frees, 1,519,101,749 bytes allocated ==326135== ==326135== LEAK SUMMARY: ==326135== definitely lost: 0 bytes in 0 blocks ==326135== indirectly lost: 0 bytes in 0 blocks ==326135== possibly lost: 0 bytes in 0 blocks ==326135== still reachable: 56 bytes in 3 blocks ==326135== suppressed: 700,698 bytes in 9,375 blocks ==326135== Reachable blocks (those to which a pointer was found) are not shown. ==326135== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==326135== ==326135== For lists of detected and suppressed errors, rerun with: -s ==326135== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)