==325767== Memcheck, a memory error detector ==325767== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==325767== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==325767== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==325767== Parent PID: 324030 ==325767== ==325767== ==325767== FILE DESCRIPTORS: 9 open (3 std) at exit. ==325767== Open file descriptor 12: ==325767== at 0x101A122D: pipe (pipe.c:29) ==325767== by 0x18A7607D: ??? ==325767== by 0x13FE14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==325767== by 0xF9C4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==325767== by 0xF95DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==325767== by 0xE654D38: PetscInitialize (pinit.c:924) ==325767== by 0xE4C9FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==325767== by 0xE4CA01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==325767== by 0x169F31: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==325767== by 0x161FB9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==325767== by 0x165300: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==325767== by 0x1651A0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==325767== by 0x165837: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==325767== by 0x1602A5: main (TestPottsBasedCellPopulation.cpp:19) ==325767== ==325767== Open file descriptor 8: /dev/shm/open_mpi.0000 ==325767== at 0x101A5BCC: __open_nocancel (open64_nocancel.c:39) ==325767== by 0x10129C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==325767== by 0xE4FE822: ??? ==325767== by 0xE4FE96F: ??? ==325767== by 0x140866DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==325767== by 0x14086938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==325767== by 0x1403C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==325767== by 0x13FE12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==325767== by 0xF9C4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==325767== by 0xF95DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==325767== by 0xE654D38: PetscInitialize (pinit.c:924) ==325767== by 0xE4C9FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==325767== by 0xE4CA01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==325767== by 0x169F31: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==325767== by 0x161FB9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==325767== by 0x165300: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==325767== by 0x1651A0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==325767== by 0x165837: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==325767== by 0x1602A5: main (TestPottsBasedCellPopulation.cpp:19) ==325767== ==325767== Open file descriptor 114: ==325767== ==325767== ==325767== Open file descriptor 110: ==325767== ==325767== ==325767== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsBasedCellPopulation_valgrind.txt ==325767== ==325767== ==325767== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==325767== ==325767== ==325767== ==325767== HEAP SUMMARY: ==325767== in use at exit: 700,754 bytes in 9,378 blocks ==325767== total heap usage: 76,710 allocs, 67,332 frees, 1,359,016,389 bytes allocated ==325767== ==325767== LEAK SUMMARY: ==325767== definitely lost: 0 bytes in 0 blocks ==325767== indirectly lost: 0 bytes in 0 blocks ==325767== possibly lost: 0 bytes in 0 blocks ==325767== still reachable: 56 bytes in 3 blocks ==325767== suppressed: 700,698 bytes in 9,375 blocks ==325767== Reachable blocks (those to which a pointer was found) are not shown. ==325767== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==325767== ==325767== For lists of detected and suppressed errors, rerun with: -s ==325767== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)