==340116== Memcheck, a memory error detector ==340116== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==340116== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==340116== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningMeshBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==340116== Parent PID: 324030 ==340116== ==340116== ==340116== FILE DESCRIPTORS: 9 open (3 std) at exit. ==340116== Open file descriptor 12: ==340116== at 0x1193822D: pipe (pipe.c:29) ==340116== by 0x1A73707D: ??? ==340116== by 0x1589F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==340116== by 0x11242418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==340116== by 0x111DBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==340116== by 0xFEB2D38: PetscInitialize (pinit.c:924) ==340116== by 0xFD89FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==340116== by 0xFD8A01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==340116== by 0x120DE7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==340116== by 0x11C673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==340116== by 0x11E90E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==340116== by 0x11E80A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==340116== by 0x11EE1D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==340116== by 0x11AE75: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==340116== ==340116== Open file descriptor 8: /dev/shm/open_mpi.0000 ==340116== at 0x1193CBCC: __open_nocancel (open64_nocancel.c:39) ==340116== by 0x118C0C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==340116== by 0x1113C822: ??? ==340116== by 0x1113C96F: ??? ==340116== by 0x159446DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==340116== by 0x15944938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==340116== by 0x158FA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==340116== by 0x1589F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==340116== by 0x11242418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==340116== by 0x111DBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==340116== by 0xFEB2D38: PetscInitialize (pinit.c:924) ==340116== by 0xFD89FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==340116== by 0xFD8A01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==340116== by 0x120DE7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==340116== by 0x11C673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==340116== by 0x11E90E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==340116== by 0x11E80A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==340116== by 0x11EE1D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==340116== by 0x11AE75: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==340116== ==340116== Open file descriptor 114: ==340116== ==340116== ==340116== Open file descriptor 110: ==340116== ==340116== ==340116== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedCryptSimulationsTutorial_valgrind.txt ==340116== ==340116== ==340116== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==340116== ==340116== ==340116== ==340116== HEAP SUMMARY: ==340116== in use at exit: 700,770 bytes in 9,378 blocks ==340116== total heap usage: 1,755,616 allocs, 1,746,238 frees, 1,530,074,067 bytes allocated ==340116== ==340116== LEAK SUMMARY: ==340116== definitely lost: 0 bytes in 0 blocks ==340116== indirectly lost: 0 bytes in 0 blocks ==340116== possibly lost: 0 bytes in 0 blocks ==340116== still reachable: 56 bytes in 3 blocks ==340116== suppressed: 700,714 bytes in 9,375 blocks ==340116== Reachable blocks (those to which a pointer was found) are not shown. ==340116== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==340116== ==340116== For lists of detected and suppressed errors, rerun with: -s ==340116== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)