==339440== Memcheck, a memory error detector ==339440== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==339440== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==339440== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningMeshBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==339440== Parent PID: 324030 ==339440== ==339440== ==339440== FILE DESCRIPTORS: 9 open (3 std) at exit. ==339440== Open file descriptor 12: ==339440== at 0x1007822D: pipe (pipe.c:29) ==339440== by 0x18A7607D: ??? ==339440== by 0x13FE14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==339440== by 0xF982418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==339440== by 0xF91BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==339440== by 0xE5F2D38: PetscInitialize (pinit.c:924) ==339440== by 0xE4C9FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==339440== by 0xE4CA01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==339440== by 0x1213E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==339440== by 0x11C9C5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==339440== by 0x11EFB4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==339440== by 0x11EE54: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==339440== by 0x11F4EB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==339440== by 0x11ACF5: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==339440== ==339440== Open file descriptor 8: /dev/shm/open_mpi.0000 ==339440== at 0x1007CBCC: __open_nocancel (open64_nocancel.c:39) ==339440== by 0x10000C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==339440== by 0xF87C822: ??? ==339440== by 0xF87C96F: ??? ==339440== by 0x140866DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==339440== by 0x14086938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==339440== by 0x1403C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==339440== by 0x13FE12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==339440== by 0xF982418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==339440== by 0xF91BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==339440== by 0xE5F2D38: PetscInitialize (pinit.c:924) ==339440== by 0xE4C9FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==339440== by 0xE4CA01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==339440== by 0x1213E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==339440== by 0x11C9C5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==339440== by 0x11EFB4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==339440== by 0x11EE54: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==339440== by 0x11F4EB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==339440== by 0x11ACF5: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==339440== ==339440== Open file descriptor 114: ==339440== ==339440== ==339440== Open file descriptor 110: ==339440== ==339440== ==339440== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedSimulationsTutorial_valgrind.txt ==339440== ==339440== ==339440== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==339440== ==339440== ==339440== ==339440== HEAP SUMMARY: ==339440== in use at exit: 700,686 bytes in 9,374 blocks ==339440== total heap usage: 3,339,566 allocs, 3,330,192 frees, 2,282,272,676 bytes allocated ==339440== ==339440== LEAK SUMMARY: ==339440== definitely lost: 0 bytes in 0 blocks ==339440== indirectly lost: 0 bytes in 0 blocks ==339440== possibly lost: 0 bytes in 0 blocks ==339440== still reachable: 56 bytes in 3 blocks ==339440== suppressed: 700,630 bytes in 9,371 blocks ==339440== Reachable blocks (those to which a pointer was found) are not shown. ==339440== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==339440== ==339440== For lists of detected and suppressed errors, rerun with: -s ==339440== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)