==339509== Memcheck, a memory error detector ==339509== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==339509== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==339509== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningTumourSpheroidSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==339509== Parent PID: 324030 ==339509== ==339509== ==339509== FILE DESCRIPTORS: 9 open (3 std) at exit. ==339509== Open file descriptor 12: ==339509== at 0xEF5D22D: pipe (pipe.c:29) ==339509== by 0x18A7707D: ??? ==339509== by 0x1407C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==339509== by 0x10860418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==339509== by 0x107F9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==339509== by 0xF4EED38: PetscInitialize (pinit.c:924) ==339509== by 0xE865FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==339509== by 0xE86601D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==339509== by 0x11BA32: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==339509== by 0x117353: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==339509== by 0x11963E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==339509== by 0x119539: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==339509== by 0x119B4D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==339509== by 0x115B55: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==339509== ==339509== Open file descriptor 8: /dev/shm/open_mpi.0000 ==339509== at 0xEF61BCC: __open_nocancel (open64_nocancel.c:39) ==339509== by 0xEEE5C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==339509== by 0xE89A822: ??? ==339509== by 0xE89A96F: ??? ==339509== by 0x141216DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==339509== by 0x14121938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==339509== by 0x140D7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==339509== by 0x1407C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==339509== by 0x10860418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==339509== by 0x107F9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==339509== by 0xF4EED38: PetscInitialize (pinit.c:924) ==339509== by 0xE865FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==339509== by 0xE86601D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==339509== by 0x11BA32: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==339509== by 0x117353: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==339509== by 0x11963E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==339509== by 0x119539: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==339509== by 0x119B4D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==339509== by 0x115B55: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==339509== ==339509== Open file descriptor 114: ==339509== ==339509== ==339509== Open file descriptor 110: ==339509== ==339509== ==339509== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningTumourSpheroidSimulationsTutorial_valgrind.txt ==339509== ==339509== ==339509== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==339509== ==339509== ==339509== ==339509== HEAP SUMMARY: ==339509== in use at exit: 700,754 bytes in 9,378 blocks ==339509== total heap usage: 2,085,971 allocs, 2,076,593 frees, 1,689,938,823 bytes allocated ==339509== ==339509== LEAK SUMMARY: ==339509== definitely lost: 0 bytes in 0 blocks ==339509== indirectly lost: 0 bytes in 0 blocks ==339509== possibly lost: 0 bytes in 0 blocks ==339509== still reachable: 56 bytes in 3 blocks ==339509== suppressed: 700,698 bytes in 9,375 blocks ==339509== Reachable blocks (those to which a pointer was found) are not shown. ==339509== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==339509== ==339509== For lists of detected and suppressed errors, rerun with: -s ==339509== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)