==340135== Memcheck, a memory error detector ==340135== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==340135== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==340135== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningVertexBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==340135== Parent PID: 324030 ==340135== ==340135== ==340135== FILE DESCRIPTORS: 9 open (3 std) at exit. ==340135== Open file descriptor 12: ==340135== at 0x1193822D: pipe (pipe.c:29) ==340135== by 0x1A73707D: ??? ==340135== by 0x1589F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==340135== by 0x11242418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==340135== by 0x111DBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==340135== by 0xFEB2D38: PetscInitialize (pinit.c:924) ==340135== by 0xFD89FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==340135== by 0xFD8A01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==340135== by 0x11FDE3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==340135== by 0x11B653: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==340135== by 0x11D8EE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==340135== by 0x11D7EA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==340135== by 0x11DDFD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==340135== by 0x119E55: main (TestRunningVertexBasedCryptSimulationsTutorial.cpp:18) ==340135== ==340135== Open file descriptor 8: /dev/shm/open_mpi.0000 ==340135== at 0x1193CBCC: __open_nocancel (open64_nocancel.c:39) ==340135== by 0x118C0C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==340135== by 0x1113C822: ??? ==340135== by 0x1113C96F: ??? ==340135== by 0x159446DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==340135== by 0x15944938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==340135== by 0x158FA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==340135== by 0x1589F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==340135== by 0x11242418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==340135== by 0x111DBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==340135== by 0xFEB2D38: PetscInitialize (pinit.c:924) ==340135== by 0xFD89FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==340135== by 0xFD8A01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==340135== by 0x11FDE3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==340135== by 0x11B653: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==340135== by 0x11D8EE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==340135== by 0x11D7EA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==340135== by 0x11DDFD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==340135== by 0x119E55: main (TestRunningVertexBasedCryptSimulationsTutorial.cpp:18) ==340135== ==340135== Open file descriptor 114: ==340135== ==340135== ==340135== Open file descriptor 110: ==340135== ==340135== ==340135== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningVertexBasedCryptSimulationsTutorial_valgrind.txt ==340135== ==340135== ==340135== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==340135== ==340135== ==340135== ==340135== HEAP SUMMARY: ==340135== in use at exit: 700,850 bytes in 9,379 blocks ==340135== total heap usage: 1,620,480 allocs, 1,611,101 frees, 1,473,826,678 bytes allocated ==340135== ==340135== LEAK SUMMARY: ==340135== definitely lost: 0 bytes in 0 blocks ==340135== indirectly lost: 0 bytes in 0 blocks ==340135== possibly lost: 0 bytes in 0 blocks ==340135== still reachable: 136 bytes in 4 blocks ==340135== suppressed: 700,714 bytes in 9,375 blocks ==340135== Reachable blocks (those to which a pointer was found) are not shown. ==340135== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==340135== ==340135== For lists of detected and suppressed errors, rerun with: -s ==340135== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)