==339698== Memcheck, a memory error detector ==339698== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==339698== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==339698== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVanLeeuwen2009WntSwatCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==339698== Parent PID: 324030 ==339698== ==339698== ==339698== FILE DESCRIPTORS: 9 open (3 std) at exit. ==339698== Open file descriptor 12: ==339698== at 0x11BBD22D: pipe (pipe.c:29) ==339698== by 0x1A73807D: ??? ==339698== by 0x158F34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==339698== by 0x114C9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==339698== by 0x11462D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==339698== by 0x10157D38: PetscInitialize (pinit.c:924) ==339698== by 0xFFCCFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==339698== by 0xFFCD01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==339698== by 0x135BA1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==339698== by 0x130495: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==339698== by 0x133244: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==339698== by 0x1330E4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==339698== by 0x13377B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==339698== by 0x12E7C5: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==339698== ==339698== Open file descriptor 8: /dev/shm/open_mpi.0000 ==339698== at 0x11BC1BCC: __open_nocancel (open64_nocancel.c:39) ==339698== by 0x11B45C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==339698== by 0x10001822: ??? ==339698== by 0x1000196F: ??? ==339698== by 0x159986DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==339698== by 0x15998938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==339698== by 0x1594E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==339698== by 0x158F32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==339698== by 0x114C9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==339698== by 0x11462D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==339698== by 0x10157D38: PetscInitialize (pinit.c:924) ==339698== by 0xFFCCFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==339698== by 0xFFCD01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==339698== by 0x135BA1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==339698== by 0x130495: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==339698== by 0x133244: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==339698== by 0x1330E4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==339698== by 0x13377B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==339698== by 0x12E7C5: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==339698== ==339698== Open file descriptor 114: ==339698== ==339698== ==339698== Open file descriptor 110: ==339698== ==339698== ==339698== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVanLeeuwen2009WntSwatCellCycleOdeSystem_valgrind.txt ==339698== ==339698== ==339698== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==339698== ==339698== ==339698== ==339698== HEAP SUMMARY: ==339698== in use at exit: 700,738 bytes in 9,377 blocks ==339698== total heap usage: 521,231 allocs, 511,854 frees, 1,562,160,460 bytes allocated ==339698== ==339698== LEAK SUMMARY: ==339698== definitely lost: 0 bytes in 0 blocks ==339698== indirectly lost: 0 bytes in 0 blocks ==339698== possibly lost: 0 bytes in 0 blocks ==339698== still reachable: 24 bytes in 2 blocks ==339698== suppressed: 700,714 bytes in 9,375 blocks ==339698== Reachable blocks (those to which a pointer was found) are not shown. ==339698== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==339698== ==339698== For lists of detected and suppressed errors, rerun with: -s ==339698== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 38 from 38)