==395564== Memcheck, a memory error detector ==395564== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==395564== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==395564== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellBasedSimulationModifierTutorial -malloc_debug -malloc_dump -memory_info ==395564== Parent PID: 380530 ==395564== ==395564== ==395564== FILE DESCRIPTORS: 9 open (3 std) at exit. ==395564== Open file descriptor 12: ==395564== at 0x100B922D: pipe (pipe.c:29) ==395564== by 0x18A7607D: ??? ==395564== by 0x13FE14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==395564== by 0xF9C3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==395564== by 0xF95CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==395564== by 0xE653D38: PetscInitialize (pinit.c:924) ==395564== by 0xE4C8FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==395564== by 0xE4C901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==395564== by 0x130631: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==395564== by 0x12BA07: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==395564== by 0x12DF58: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==395564== by 0x12DE53: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==395564== by 0x12E467: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==395564== by 0x12A1C5: main (TestCreatingAndUsingANewCellBasedSimulationModifierTutorial.cpp:18) ==395564== ==395564== Open file descriptor 8: /dev/shm/open_mpi.0000 ==395564== at 0x100BDBCC: __open_nocancel (open64_nocancel.c:39) ==395564== by 0x10041C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==395564== by 0xE4FD822: ??? ==395564== by 0xE4FD96F: ??? ==395564== by 0x140866DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==395564== by 0x14086938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==395564== by 0x1403C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==395564== by 0x13FE12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==395564== by 0xF9C3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==395564== by 0xF95CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==395564== by 0xE653D38: PetscInitialize (pinit.c:924) ==395564== by 0xE4C8FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==395564== by 0xE4C901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==395564== by 0x130631: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==395564== by 0x12BA07: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==395564== by 0x12DF58: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==395564== by 0x12DE53: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==395564== by 0x12E467: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==395564== by 0x12A1C5: main (TestCreatingAndUsingANewCellBasedSimulationModifierTutorial.cpp:18) ==395564== ==395564== Open file descriptor 115: ==395564== ==395564== ==395564== Open file descriptor 111: ==395564== ==395564== ==395564== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellBasedSimulationModifierTutorial_valgrind.txt ==395564== ==395564== ==395564== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==395564== ==395564== ==395564== ==395564== HEAP SUMMARY: ==395564== in use at exit: 700,754 bytes in 9,378 blocks ==395564== total heap usage: 518,497 allocs, 509,119 frees, 1,667,437,902 bytes allocated ==395564== ==395564== LEAK SUMMARY: ==395564== definitely lost: 0 bytes in 0 blocks ==395564== indirectly lost: 0 bytes in 0 blocks ==395564== possibly lost: 0 bytes in 0 blocks ==395564== still reachable: 56 bytes in 3 blocks ==395564== suppressed: 700,698 bytes in 9,375 blocks ==395564== Reachable blocks (those to which a pointer was found) are not shown. ==395564== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==395564== ==395564== For lists of detected and suppressed errors, rerun with: -s ==395564== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 40 from 40)