==382248== Memcheck, a memory error detector ==382248== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==382248== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==382248== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithBuskeUpdate -malloc_debug -malloc_dump -memory_info ==382248== Parent PID: 380530 ==382248== ==382248== ==382248== FILE DESCRIPTORS: 9 open (3 std) at exit. ==382248== Open file descriptor 12: ==382248== at 0xEC0222D: pipe (pipe.c:29) ==382248== by 0x18A7607D: ??? ==382248== by 0x1407F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==382248== by 0x1085F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==382248== by 0x107F8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==382248== by 0xF4EDD38: PetscInitialize (pinit.c:924) ==382248== by 0xE4C8FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==382248== by 0xE4C901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==382248== by 0x2CC620: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==382248== by 0x2C3AD7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==382248== by 0x2C7EF0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==382248== by 0x2C7DEB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==382248== by 0x2C83FF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==382248== by 0x2C2295: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==382248== ==382248== Open file descriptor 8: /dev/shm/open_mpi.0000 ==382248== at 0xEC06BCC: __open_nocancel (open64_nocancel.c:39) ==382248== by 0xEB8AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==382248== by 0xE4FD822: ??? ==382248== by 0xE4FD96F: ??? ==382248== by 0x141246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==382248== by 0x14124938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==382248== by 0x140DA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==382248== by 0x1407F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==382248== by 0x1085F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==382248== by 0x107F8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==382248== by 0xF4EDD38: PetscInitialize (pinit.c:924) ==382248== by 0xE4C8FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==382248== by 0xE4C901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==382248== by 0x2CC620: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==382248== by 0x2C3AD7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==382248== by 0x2C7EF0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==382248== by 0x2C7DEB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==382248== by 0x2C83FF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==382248== by 0x2C2295: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==382248== ==382248== Open file descriptor 115: ==382248== ==382248== ==382248== Open file descriptor 111: ==382248== ==382248== ==382248== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithBuskeUpdate_valgrind.txt ==382248== ==382248== ==382248== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==382248== ==382248== ==382248== ==382248== HEAP SUMMARY: ==382248== in use at exit: 700,754 bytes in 9,378 blocks ==382248== total heap usage: 58,760 allocs, 49,382 frees, 1,355,249,571 bytes allocated ==382248== ==382248== LEAK SUMMARY: ==382248== definitely lost: 0 bytes in 0 blocks ==382248== indirectly lost: 0 bytes in 0 blocks ==382248== possibly lost: 0 bytes in 0 blocks ==382248== still reachable: 56 bytes in 3 blocks ==382248== suppressed: 700,698 bytes in 9,375 blocks ==382248== Reachable blocks (those to which a pointer was found) are not shown. ==382248== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==382248== ==382248== For lists of detected and suppressed errors, rerun with: -s ==382248== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)