==434400== Memcheck, a memory error detector ==434400== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==434400== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==434400== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==434400== Parent PID: 418571 ==434400== ==434400== ==434400== FILE DESCRIPTORS: 9 open (3 std) at exit. ==434400== Open file descriptor 12: ==434400== at 0x105AD22D: pipe (pipe.c:29) ==434400== by 0x1A73B07D: ??? ==434400== by 0x1593D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==434400== by 0x12208418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==434400== by 0x121A1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==434400== by 0x10E98D38: PetscInitialize (pinit.c:924) ==434400== by 0xFD8AFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==434400== by 0xFD8B01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==434400== by 0x23B7D2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==434400== by 0x2319A9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==434400== by 0x2360DA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==434400== by 0x235F7A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==434400== by 0x236611: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==434400== by 0x22FC95: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==434400== ==434400== Open file descriptor 8: /dev/shm/open_mpi.0000 ==434400== at 0x105B1BCC: __open_nocancel (open64_nocancel.c:39) ==434400== by 0x10535C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==434400== by 0xFDBF822: ??? ==434400== by 0xFDBF96F: ??? ==434400== by 0x159E26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==434400== by 0x159E2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==434400== by 0x15998922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==434400== by 0x1593D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==434400== by 0x12208418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==434400== by 0x121A1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==434400== by 0x10E98D38: PetscInitialize (pinit.c:924) ==434400== by 0xFD8AFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==434400== by 0xFD8B01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==434400== by 0x23B7D2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==434400== by 0x2319A9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==434400== by 0x2360DA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==434400== by 0x235F7A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==434400== by 0x236611: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==434400== by 0x22FC95: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==434400== ==434400== Open file descriptor 115: ==434400== ==434400== ==434400== Open file descriptor 111: ==434400== ==434400== ==434400== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==434400== ==434400== ==434400== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==434400== ==434400== ==434400== ==434400== HEAP SUMMARY: ==434400== in use at exit: 700,702 bytes in 9,374 blocks ==434400== total heap usage: 6,313,248 allocs, 6,303,874 frees, 2,073,017,335 bytes allocated ==434400== ==434400== LEAK SUMMARY: ==434400== definitely lost: 0 bytes in 0 blocks ==434400== indirectly lost: 0 bytes in 0 blocks ==434400== possibly lost: 0 bytes in 0 blocks ==434400== still reachable: 56 bytes in 3 blocks ==434400== suppressed: 700,646 bytes in 9,371 blocks ==434400== Reachable blocks (those to which a pointer was found) are not shown. ==434400== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==434400== ==434400== For lists of detected and suppressed errors, rerun with: -s ==434400== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)