==420291== Memcheck, a memory error detector ==420291== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==420291== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==420291== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==420291== Parent PID: 418571 ==420291== ==420291== ==420291== FILE DESCRIPTORS: 9 open (3 std) at exit. ==420291== Open file descriptor 12: ==420291== at 0xEC9522D: pipe (pipe.c:29) ==420291== by 0x18A7807D: ??? ==420291== by 0x1407F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==420291== by 0x10861418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==420291== by 0x107FAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==420291== by 0xF4EFD38: PetscInitialize (pinit.c:924) ==420291== by 0xE559FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==420291== by 0xE55A01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==420291== by 0x2E28FC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==420291== by 0x2D9189: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==420291== by 0x2DD9E6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==420291== by 0x2DD886: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==420291== by 0x2DDF1D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==420291== by 0x2D7475: main (TestNodeBasedCellPopulation.cpp:19) ==420291== ==420291== Open file descriptor 8: /dev/shm/open_mpi.0000 ==420291== at 0xEC99BCC: __open_nocancel (open64_nocancel.c:39) ==420291== by 0xEC1DC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==420291== by 0xE58E822: ??? ==420291== by 0xE58E96F: ??? ==420291== by 0x141246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==420291== by 0x14124938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==420291== by 0x140DA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==420291== by 0x1407F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==420291== by 0x10861418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==420291== by 0x107FAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==420291== by 0xF4EFD38: PetscInitialize (pinit.c:924) ==420291== by 0xE559FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==420291== by 0xE55A01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==420291== by 0x2E28FC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==420291== by 0x2D9189: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==420291== by 0x2DD9E6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==420291== by 0x2DD886: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==420291== by 0x2DDF1D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==420291== by 0x2D7475: main (TestNodeBasedCellPopulation.cpp:19) ==420291== ==420291== Open file descriptor 115: ==420291== ==420291== ==420291== Open file descriptor 111: ==420291== ==420291== ==420291== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==420291== ==420291== ==420291== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==420291== ==420291== ==420291== ==420291== HEAP SUMMARY: ==420291== in use at exit: 700,686 bytes in 9,374 blocks ==420291== total heap usage: 20,194,309 allocs, 20,184,935 frees, 2,577,989,183 bytes allocated ==420291== ==420291== LEAK SUMMARY: ==420291== definitely lost: 0 bytes in 0 blocks ==420291== indirectly lost: 0 bytes in 0 blocks ==420291== possibly lost: 0 bytes in 0 blocks ==420291== still reachable: 56 bytes in 3 blocks ==420291== suppressed: 700,630 bytes in 9,371 blocks ==420291== Reachable blocks (those to which a pointer was found) are not shown. ==420291== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==420291== ==420291== For lists of detected and suppressed errors, rerun with: -s ==420291== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)