==420686== Memcheck, a memory error detector ==420686== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==420686== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==420686== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation3d -malloc_debug -malloc_dump -memory_info ==420686== Parent PID: 418571 ==420686== ==420686== ==420686== FILE DESCRIPTORS: 9 open (3 std) at exit. ==420686== Open file descriptor 12: ==420686== at 0x101A222D: pipe (pipe.c:29) ==420686== by 0x18A7807D: ??? ==420686== by 0x13FE14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==420686== by 0xF9C5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==420686== by 0xF95ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==420686== by 0xE655D38: PetscInitialize (pinit.c:924) ==420686== by 0xE4CAFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==420686== by 0xE4CB01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==420686== by 0x1FF501: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==420686== by 0x1F9477: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==420686== by 0x1FC78C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==420686== by 0x1FC688: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==420686== by 0x1FCC9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==420686== by 0x1F7C35: main (TestOffLatticeSimulation3d.cpp:18) ==420686== ==420686== Open file descriptor 8: /dev/shm/open_mpi.0000 ==420686== at 0x101A6BCC: __open_nocancel (open64_nocancel.c:39) ==420686== by 0x1012AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==420686== by 0xE4FF822: ??? ==420686== by 0xE4FF96F: ??? ==420686== by 0x140866DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==420686== by 0x14086938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==420686== by 0x1403C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==420686== by 0x13FE12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==420686== by 0xF9C5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==420686== by 0xF95ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==420686== by 0xE655D38: PetscInitialize (pinit.c:924) ==420686== by 0xE4CAFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==420686== by 0xE4CB01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==420686== by 0x1FF501: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==420686== by 0x1F9477: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==420686== by 0x1FC78C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==420686== by 0x1FC688: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==420686== by 0x1FCC9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==420686== by 0x1F7C35: main (TestOffLatticeSimulation3d.cpp:18) ==420686== ==420686== Open file descriptor 115: ==420686== ==420686== ==420686== Open file descriptor 111: ==420686== ==420686== ==420686== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation3d_valgrind.txt ==420686== ==420686== ==420686== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==420686== ==420686== ==420686== ==420686== HEAP SUMMARY: ==420686== in use at exit: 700,754 bytes in 9,378 blocks ==420686== total heap usage: 856,183 allocs, 846,805 frees, 1,519,099,665 bytes allocated ==420686== ==420686== LEAK SUMMARY: ==420686== definitely lost: 0 bytes in 0 blocks ==420686== indirectly lost: 0 bytes in 0 blocks ==420686== possibly lost: 0 bytes in 0 blocks ==420686== still reachable: 56 bytes in 3 blocks ==420686== suppressed: 700,698 bytes in 9,375 blocks ==420686== Reachable blocks (those to which a pointer was found) are not shown. ==420686== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==420686== ==420686== For lists of detected and suppressed errors, rerun with: -s ==420686== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)