==420778== Memcheck, a memory error detector ==420778== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==420778== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==420778== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==420778== Parent PID: 418571 ==420778== ==420778== ==420778== FILE DESCRIPTORS: 9 open (3 std) at exit. ==420778== Open file descriptor 12: ==420778== at 0xECED22D: pipe (pipe.c:29) ==420778== by 0x18A7807D: ??? ==420778== by 0x1407F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==420778== by 0x10948418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==420778== by 0x108E1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==420778== by 0xF5D8D38: PetscInitialize (pinit.c:924) ==420778== by 0xE4CAFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==420778== by 0xE4CB01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==420778== by 0x2129C6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==420778== by 0x209F69: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==420778== by 0x20DBB8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==420778== by 0x20DA58: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==420778== by 0x20E0EF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==420778== by 0x208255: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==420778== ==420778== Open file descriptor 8: /dev/shm/open_mpi.0000 ==420778== at 0xECF1BCC: __open_nocancel (open64_nocancel.c:39) ==420778== by 0xEC75C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==420778== by 0xE4FF822: ??? ==420778== by 0xE4FF96F: ??? ==420778== by 0x141246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==420778== by 0x14124938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==420778== by 0x140DA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==420778== by 0x1407F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==420778== by 0x10948418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==420778== by 0x108E1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==420778== by 0xF5D8D38: PetscInitialize (pinit.c:924) ==420778== by 0xE4CAFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==420778== by 0xE4CB01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==420778== by 0x2129C6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==420778== by 0x209F69: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==420778== by 0x20DBB8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==420778== by 0x20DA58: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==420778== by 0x20E0EF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==420778== by 0x208255: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==420778== ==420778== Open file descriptor 115: ==420778== ==420778== ==420778== Open file descriptor 111: ==420778== ==420778== ==420778== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulation_valgrind.txt ==420778== ==420778== ==420778== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==420778== ==420778== ==420778== ==420778== HEAP SUMMARY: ==420778== in use at exit: 700,718 bytes in 9,375 blocks ==420778== total heap usage: 17,958,629 allocs, 17,949,254 frees, 30,093,610,555 bytes allocated ==420778== ==420778== LEAK SUMMARY: ==420778== definitely lost: 0 bytes in 0 blocks ==420778== indirectly lost: 0 bytes in 0 blocks ==420778== possibly lost: 0 bytes in 0 blocks ==420778== still reachable: 88 bytes in 4 blocks ==420778== suppressed: 700,630 bytes in 9,371 blocks ==420778== Reachable blocks (those to which a pointer was found) are not shown. ==420778== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==420778== ==420778== For lists of detected and suppressed errors, rerun with: -s ==420778== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)