==420879== Memcheck, a memory error detector ==420879== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==420879== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==420879== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==420879== Parent PID: 418571 ==420879== ==420879== ==420879== FILE DESCRIPTORS: 9 open (3 std) at exit. ==420879== Open file descriptor 12: ==420879== at 0xF08922D: pipe (pipe.c:29) ==420879== by 0x18A7707D: ??? ==420879== by 0x1407C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==420879== by 0x10948418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==420879== by 0x108E1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==420879== by 0xF5D8D38: PetscInitialize (pinit.c:924) ==420879== by 0xE866FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==420879== by 0xE86701D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==420879== by 0x22565C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==420879== by 0x21ECDF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==420879== by 0x22284A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==420879== by 0x2226EA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==420879== by 0x222D81: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==420879== by 0x21CF95: main (TestOffLatticeSimulationWithPdes.cpp:19) ==420879== ==420879== Open file descriptor 8: /dev/shm/open_mpi.0000 ==420879== at 0xF08DBCC: __open_nocancel (open64_nocancel.c:39) ==420879== by 0xF011C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==420879== by 0xE89B822: ??? ==420879== by 0xE89B96F: ??? ==420879== by 0x141216DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==420879== by 0x14121938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==420879== by 0x140D7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==420879== by 0x1407C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==420879== by 0x10948418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==420879== by 0x108E1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==420879== by 0xF5D8D38: PetscInitialize (pinit.c:924) ==420879== by 0xE866FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==420879== by 0xE86701D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==420879== by 0x22565C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==420879== by 0x21ECDF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==420879== by 0x22284A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==420879== by 0x2226EA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==420879== by 0x222D81: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==420879== by 0x21CF95: main (TestOffLatticeSimulationWithPdes.cpp:19) ==420879== ==420879== Open file descriptor 115: ==420879== ==420879== ==420879== Open file descriptor 111: ==420879== ==420879== ==420879== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==420879== ==420879== ==420879== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==420879== ==420879== ==420879== ==420879== HEAP SUMMARY: ==420879== in use at exit: 700,686 bytes in 9,374 blocks ==420879== total heap usage: 7,518,706 allocs, 7,509,332 frees, 2,663,682,470 bytes allocated ==420879== ==420879== LEAK SUMMARY: ==420879== definitely lost: 0 bytes in 0 blocks ==420879== indirectly lost: 0 bytes in 0 blocks ==420879== possibly lost: 0 bytes in 0 blocks ==420879== still reachable: 56 bytes in 3 blocks ==420879== suppressed: 700,630 bytes in 9,371 blocks ==420879== Reachable blocks (those to which a pointer was found) are not shown. ==420879== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==420879== ==420879== For lists of detected and suppressed errors, rerun with: -s ==420879== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 39 from 39)