==433344== Memcheck, a memory error detector ==433344== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==433344== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==433344== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==433344== Parent PID: 418571 ==433344== ==433344== ==433344== FILE DESCRIPTORS: 9 open (3 std) at exit. ==433344== Open file descriptor 12: ==433344== at 0xECED22D: pipe (pipe.c:29) ==433344== by 0x18A7807D: ??? ==433344== by 0x1407F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==433344== by 0x10948418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==433344== by 0x108E1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==433344== by 0xF5D8D38: PetscInitialize (pinit.c:924) ==433344== by 0xE4CAFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==433344== by 0xE4CB01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==433344== by 0x1D69EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==433344== by 0x1CE2C9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==433344== by 0x1D1B48: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==433344== by 0x1D19E8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==433344== by 0x1D207F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==433344== by 0x1CC5B5: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==433344== ==433344== Open file descriptor 8: /dev/shm/open_mpi.0000 ==433344== at 0xECF1BCC: __open_nocancel (open64_nocancel.c:39) ==433344== by 0xEC75C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==433344== by 0xE4FF822: ??? ==433344== by 0xE4FF96F: ??? ==433344== by 0x141246DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==433344== by 0x14124938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==433344== by 0x140DA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==433344== by 0x1407F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==433344== by 0x10948418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==433344== by 0x108E1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==433344== by 0xF5D8D38: PetscInitialize (pinit.c:924) ==433344== by 0xE4CAFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==433344== by 0xE4CB01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==433344== by 0x1D69EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==433344== by 0x1CE2C9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==433344== by 0x1D1B48: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==433344== by 0x1D19E8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==433344== by 0x1D207F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==433344== by 0x1CC5B5: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==433344== ==433344== Open file descriptor 115: ==433344== ==433344== ==433344== Open file descriptor 111: ==433344== ==433344== ==433344== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPottsBasedCellPopulation_valgrind.txt ==433344== ==433344== ==433344== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==433344== ==433344== ==433344== ==433344== HEAP SUMMARY: ==433344== in use at exit: 700,702 bytes in 9,375 blocks ==433344== total heap usage: 11,688,605 allocs, 11,679,230 frees, 2,224,470,273 bytes allocated ==433344== ==433344== LEAK SUMMARY: ==433344== definitely lost: 0 bytes in 0 blocks ==433344== indirectly lost: 0 bytes in 0 blocks ==433344== possibly lost: 0 bytes in 0 blocks ==433344== still reachable: 72 bytes in 4 blocks ==433344== suppressed: 700,630 bytes in 9,371 blocks ==433344== Reachable blocks (those to which a pointer was found) are not shown. ==433344== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==433344== ==433344== For lists of detected and suppressed errors, rerun with: -s ==433344== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)