==420355== Memcheck, a memory error detector ==420355== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==420355== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==420355== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsUpdateRules -malloc_debug -malloc_dump -memory_info ==420355== Parent PID: 418571 ==420355== ==420355== ==420355== FILE DESCRIPTORS: 9 open (3 std) at exit. ==420355== Open file descriptor 12: ==420355== at 0xE80322D: pipe (pipe.c:29) ==420355== by 0x18A7707D: ??? ==420355== by 0x12FC84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==420355== by 0xE10D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==420355== by 0xE0A6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==420355== by 0xCD9DD38: PetscInitialize (pinit.c:924) ==420355== by 0xCC10FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==420355== by 0xCC1101D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==420355== by 0x132FF7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==420355== by 0x12BA75: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==420355== by 0x12E7F6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==420355== by 0x12E696: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==420355== by 0x12ED2D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==420355== by 0x129DA5: main (TestPottsUpdateRules.cpp:19) ==420355== ==420355== Open file descriptor 8: /dev/shm/open_mpi.0000 ==420355== at 0xE807BCC: __open_nocancel (open64_nocancel.c:39) ==420355== by 0xE78BC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==420355== by 0xCC45822: ??? ==420355== by 0xCC4596F: ??? ==420355== by 0x1306D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==420355== by 0x1306D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==420355== by 0x13023922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==420355== by 0x12FC82DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==420355== by 0xE10D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==420355== by 0xE0A6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==420355== by 0xCD9DD38: PetscInitialize (pinit.c:924) ==420355== by 0xCC10FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==420355== by 0xCC1101D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==420355== by 0x132FF7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==420355== by 0x12BA75: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==420355== by 0x12E7F6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==420355== by 0x12E696: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==420355== by 0x12ED2D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==420355== by 0x129DA5: main (TestPottsUpdateRules.cpp:19) ==420355== ==420355== Open file descriptor 115: ==420355== ==420355== ==420355== Open file descriptor 111: ==420355== ==420355== ==420355== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsUpdateRules_valgrind.txt ==420355== ==420355== ==420355== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==420355== ==420355== ==420355== ==420355== HEAP SUMMARY: ==420355== in use at exit: 700,754 bytes in 9,378 blocks ==420355== total heap usage: 69,270 allocs, 59,892 frees, 1,355,013,486 bytes allocated ==420355== ==420355== LEAK SUMMARY: ==420355== definitely lost: 0 bytes in 0 blocks ==420355== indirectly lost: 0 bytes in 0 blocks ==420355== possibly lost: 0 bytes in 0 blocks ==420355== still reachable: 56 bytes in 3 blocks ==420355== suppressed: 700,698 bytes in 9,375 blocks ==420355== Reachable blocks (those to which a pointer was found) are not shown. ==420355== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==420355== ==420355== For lists of detected and suppressed errors, rerun with: -s ==420355== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)