==434117== Memcheck, a memory error detector ==434117== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==434117== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==434117== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningTumourSpheroidSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==434117== Parent PID: 418571 ==434117== ==434117== ==434117== FILE DESCRIPTORS: 9 open (3 std) at exit. ==434117== Open file descriptor 12: ==434117== at 0xEF5E22D: pipe (pipe.c:29) ==434117== by 0x18A7707D: ??? ==434117== by 0x1407C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==434117== by 0x10861418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==434117== by 0x107FAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==434117== by 0xF4EFD38: PetscInitialize (pinit.c:924) ==434117== by 0xE866FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==434117== by 0xE86701D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==434117== by 0x11BA12: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==434117== by 0x117333: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==434117== by 0x11961E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==434117== by 0x119519: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==434117== by 0x119B2D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==434117== by 0x115B35: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==434117== ==434117== Open file descriptor 8: /dev/shm/open_mpi.0000 ==434117== at 0xEF62BCC: __open_nocancel (open64_nocancel.c:39) ==434117== by 0xEEE6C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==434117== by 0xE89B822: ??? ==434117== by 0xE89B96F: ??? ==434117== by 0x141216DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==434117== by 0x14121938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==434117== by 0x140D7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==434117== by 0x1407C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==434117== by 0x10861418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==434117== by 0x107FAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==434117== by 0xF4EFD38: PetscInitialize (pinit.c:924) ==434117== by 0xE866FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==434117== by 0xE86701D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==434117== by 0x11BA12: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==434117== by 0x117333: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==434117== by 0x11961E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==434117== by 0x119519: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==434117== by 0x119B2D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==434117== by 0x115B35: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==434117== ==434117== Open file descriptor 115: ==434117== ==434117== ==434117== Open file descriptor 111: ==434117== ==434117== ==434117== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningTumourSpheroidSimulationsTutorial_valgrind.txt ==434117== ==434117== ==434117== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==434117== ==434117== ==434117== ==434117== HEAP SUMMARY: ==434117== in use at exit: 700,754 bytes in 9,378 blocks ==434117== total heap usage: 2,087,778 allocs, 2,078,400 frees, 1,690,241,077 bytes allocated ==434117== ==434117== LEAK SUMMARY: ==434117== definitely lost: 0 bytes in 0 blocks ==434117== indirectly lost: 0 bytes in 0 blocks ==434117== possibly lost: 0 bytes in 0 blocks ==434117== still reachable: 56 bytes in 3 blocks ==434117== suppressed: 700,698 bytes in 9,375 blocks ==434117== Reachable blocks (those to which a pointer was found) are not shown. ==434117== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==434117== ==434117== For lists of detected and suppressed errors, rerun with: -s ==434117== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)