==420164== Memcheck, a memory error detector ==420164== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==420164== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==420164== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestTysonNovak2001OdeSystem -malloc_debug -malloc_dump -memory_info ==420164== Parent PID: 418571 ==420164== ==420164== ==420164== FILE DESCRIPTORS: 9 open (3 std) at exit. ==420164== Open file descriptor 12: ==420164== at 0xD2BD22D: pipe (pipe.c:29) ==420164== by 0x18A7707D: ??? ==420164== by 0x1402D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==420164== by 0x1051A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==420164== by 0x104B3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==420164== by 0xF1AAD38: PetscInitialize (pinit.c:924) ==420164== by 0xCEC8FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==420164== by 0xCEC901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==420164== by 0x12417A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==420164== by 0x11F743: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==420164== by 0x121D24: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==420164== by 0x121C20: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==420164== by 0x122233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==420164== by 0x11DF45: main (TestTysonNovak2001OdeSystem.cpp:18) ==420164== ==420164== Open file descriptor 8: /dev/shm/open_mpi.0000 ==420164== at 0xD2C1BCC: __open_nocancel (open64_nocancel.c:39) ==420164== by 0xD245C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==420164== by 0xCEFD822: ??? ==420164== by 0xCEFD96F: ??? ==420164== by 0x140D26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==420164== by 0x140D2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==420164== by 0x14088922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==420164== by 0x1402D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==420164== by 0x1051A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==420164== by 0x104B3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==420164== by 0xF1AAD38: PetscInitialize (pinit.c:924) ==420164== by 0xCEC8FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==420164== by 0xCEC901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==420164== by 0x12417A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==420164== by 0x11F743: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==420164== by 0x121D24: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==420164== by 0x121C20: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==420164== by 0x122233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==420164== by 0x11DF45: main (TestTysonNovak2001OdeSystem.cpp:18) ==420164== ==420164== Open file descriptor 115: ==420164== ==420164== ==420164== Open file descriptor 111: ==420164== ==420164== ==420164== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestTysonNovak2001OdeSystem_valgrind.txt ==420164== ==420164== ==420164== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==420164== ==420164== ==420164== ==420164== HEAP SUMMARY: ==420164== in use at exit: 700,722 bytes in 9,377 blocks ==420164== total heap usage: 60,195 allocs, 50,818 frees, 1,354,349,986 bytes allocated ==420164== ==420164== LEAK SUMMARY: ==420164== definitely lost: 0 bytes in 0 blocks ==420164== indirectly lost: 0 bytes in 0 blocks ==420164== possibly lost: 0 bytes in 0 blocks ==420164== still reachable: 24 bytes in 2 blocks ==420164== suppressed: 700,698 bytes in 9,375 blocks ==420164== Reachable blocks (those to which a pointer was found) are not shown. ==420164== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==420164== ==420164== For lists of detected and suppressed errors, rerun with: -s ==420164== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)