==498270== Memcheck, a memory error detector ==498270== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==498270== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==498270== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/Test2dVertexBasedSimulationWithSrnModels -malloc_debug -malloc_dump -memory_info ==498270== Parent PID: 496422 ==498270== ==498270== ==498270== FILE DESCRIPTORS: 9 open (3 std) at exit. ==498270== Open file descriptor 12: ==498270== at 0xEB4F22D: pipe (pipe.c:29) ==498270== by 0x18A0707D: ??? ==498270== by 0x140084CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==498270== by 0x107EE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==498270== by 0x10787D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==498270== by 0xF47ED38: PetscInitialize (pinit.c:924) ==498270== by 0xE457FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==498270== by 0xE45801D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==498270== by 0x122316: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==498270== by 0x11DA85: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==498270== by 0x11FE74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==498270== by 0x11FD14: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==498270== by 0x1203AB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==498270== by 0x11BDB5: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==498270== ==498270== Open file descriptor 8: /dev/shm/open_mpi.0000 ==498270== at 0xEB53BCC: __open_nocancel (open64_nocancel.c:39) ==498270== by 0xEAD7C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==498270== by 0xE48C822: ??? ==498270== by 0xE48C96F: ??? ==498270== by 0x140AD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==498270== by 0x140AD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==498270== by 0x14063922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==498270== by 0x140082DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==498270== by 0x107EE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==498270== by 0x10787D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==498270== by 0xF47ED38: PetscInitialize (pinit.c:924) ==498270== by 0xE457FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==498270== by 0xE45801D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==498270== by 0x122316: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==498270== by 0x11DA85: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==498270== by 0x11FE74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==498270== by 0x11FD14: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==498270== by 0x1203AB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==498270== by 0x11BDB5: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==498270== ==498270== Open file descriptor 115: ==498270== ==498270== ==498270== Open file descriptor 111: ==498270== ==498270== ==498270== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test2dVertexBasedSimulationWithSrnModels_valgrind.txt ==498270== ==498270== ==498270== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==498270== ==498270== ==498270== ==498270== HEAP SUMMARY: ==498270== in use at exit: 700,754 bytes in 9,378 blocks ==498270== total heap usage: 1,126,599 allocs, 1,117,221 frees, 1,431,031,897 bytes allocated ==498270== ==498270== LEAK SUMMARY: ==498270== definitely lost: 0 bytes in 0 blocks ==498270== indirectly lost: 0 bytes in 0 blocks ==498270== possibly lost: 0 bytes in 0 blocks ==498270== still reachable: 56 bytes in 3 blocks ==498270== suppressed: 700,698 bytes in 9,375 blocks ==498270== Reachable blocks (those to which a pointer was found) are not shown. ==498270== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==498270== ==498270== For lists of detected and suppressed errors, rerun with: -s ==498270== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)