==511643== Memcheck, a memory error detector ==511643== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==511643== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==511643== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellMutationStateTutorial -malloc_debug -malloc_dump -memory_info ==511643== Parent PID: 496422 ==511643== ==511643== ==511643== FILE DESCRIPTORS: 9 open (3 std) at exit. ==511643== Open file descriptor 12: ==511643== at 0x1004822D: pipe (pipe.c:29) ==511643== by 0x18A0507D: ??? ==511643== by 0x13F684CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==511643== by 0xF952418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==511643== by 0xF8EBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==511643== by 0xE5E2D38: PetscInitialize (pinit.c:924) ==511643== by 0xE457FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==511643== by 0xE45801D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==511643== by 0x149AB3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==511643== by 0x144469: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==511643== by 0x147162: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==511643== by 0x147002: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==511643== by 0x147699: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==511643== by 0x142755: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==511643== ==511643== Open file descriptor 8: /dev/shm/open_mpi.0000 ==511643== at 0x1004CBCC: __open_nocancel (open64_nocancel.c:39) ==511643== by 0xFFD0C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==511643== by 0xE48C822: ??? ==511643== by 0xE48C96F: ??? ==511643== by 0x1400F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==511643== by 0x1400F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==511643== by 0x13FC5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==511643== by 0x13F682DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==511643== by 0xF952418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==511643== by 0xF8EBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==511643== by 0xE5E2D38: PetscInitialize (pinit.c:924) ==511643== by 0xE457FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==511643== by 0xE45801D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==511643== by 0x149AB3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==511643== by 0x144469: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==511643== by 0x147162: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==511643== by 0x147002: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==511643== by 0x147699: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==511643== by 0x142755: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==511643== ==511643== Open file descriptor 115: ==511643== ==511643== ==511643== Open file descriptor 111: ==511643== ==511643== ==511643== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellMutationStateTutorial_valgrind.txt ==511643== ==511643== ==511643== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==511643== ==511643== ==511643== ==511643== HEAP SUMMARY: ==511643== in use at exit: 700,686 bytes in 9,374 blocks ==511643== total heap usage: 4,264,766 allocs, 4,255,392 frees, 1,913,618,424 bytes allocated ==511643== ==511643== LEAK SUMMARY: ==511643== definitely lost: 0 bytes in 0 blocks ==511643== indirectly lost: 0 bytes in 0 blocks ==511643== possibly lost: 0 bytes in 0 blocks ==511643== still reachable: 56 bytes in 3 blocks ==511643== suppressed: 700,630 bytes in 9,371 blocks ==511643== Reachable blocks (those to which a pointer was found) are not shown. ==511643== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==511643== ==511643== For lists of detected and suppressed errors, rerun with: -s ==511643== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)