==512227== Memcheck, a memory error detector ==512227== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==512227== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==512227== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==512227== Parent PID: 496422 ==512227== ==512227== ==512227== FILE DESCRIPTORS: 9 open (3 std) at exit. ==512227== Open file descriptor 12: ==512227== at 0x1190822D: pipe (pipe.c:29) ==512227== by 0x1A6C507D: ??? ==512227== by 0x1582B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==512227== by 0x11212418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==512227== by 0x111ABD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==512227== by 0xFEA2D38: PetscInitialize (pinit.c:924) ==512227== by 0xFD17FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==512227== by 0xFD1801D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==512227== by 0x224817: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==512227== by 0x21BFE9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==512227== by 0x21FBF0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==512227== by 0x21FA90: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==512227== by 0x220127: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==512227== by 0x21A2D5: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==512227== ==512227== Open file descriptor 8: /dev/shm/open_mpi.0000 ==512227== at 0x1190CBCC: __open_nocancel (open64_nocancel.c:39) ==512227== by 0x11890C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==512227== by 0xFD4C822: ??? ==512227== by 0xFD4C96F: ??? ==512227== by 0x158D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==512227== by 0x158D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==512227== by 0x15886922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==512227== by 0x1582B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==512227== by 0x11212418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==512227== by 0x111ABD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==512227== by 0xFEA2D38: PetscInitialize (pinit.c:924) ==512227== by 0xFD17FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==512227== by 0xFD1801D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==512227== by 0x224817: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==512227== by 0x21BFE9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==512227== by 0x21FBF0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==512227== by 0x21FA90: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==512227== by 0x220127: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==512227== by 0x21A2D5: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==512227== ==512227== Open file descriptor 115: ==512227== ==512227== ==512227== Open file descriptor 111: ==512227== ==512227== ==512227== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithVertexBasedCellPopulation_valgrind.txt ==512227== ==512227== ==512227== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==512227== ==512227== ==512227== ==512227== HEAP SUMMARY: ==512227== in use at exit: 700,702 bytes in 9,374 blocks ==512227== total heap usage: 3,719,989 allocs, 3,710,615 frees, 1,636,712,583 bytes allocated ==512227== ==512227== LEAK SUMMARY: ==512227== definitely lost: 0 bytes in 0 blocks ==512227== indirectly lost: 0 bytes in 0 blocks ==512227== possibly lost: 0 bytes in 0 blocks ==512227== still reachable: 56 bytes in 3 blocks ==512227== suppressed: 700,646 bytes in 9,371 blocks ==512227== Reachable blocks (those to which a pointer was found) are not shown. ==512227== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==512227== ==512227== For lists of detected and suppressed errors, rerun with: -s ==512227== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)