==498920== Memcheck, a memory error detector ==498920== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==498920== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==498920== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==498920== Parent PID: 496422 ==498920== ==498920== ==498920== FILE DESCRIPTORS: 9 open (3 std) at exit. ==498920== Open file descriptor 12: ==498920== at 0xF0F622D: pipe (pipe.c:29) ==498920== by 0x18A0407D: ??? ==498920== by 0x1412B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==498920== by 0x10D51418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==498920== by 0x10CEAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==498920== by 0xF9E1D38: PetscInitialize (pinit.c:924) ==498920== by 0xE457FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==498920== by 0xE45801D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==498920== by 0x1D25F2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==498920== by 0x1CBF89: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==498920== by 0x1CF724: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==498920== by 0x1CF5C4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==498920== by 0x1CFC5B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==498920== by 0x1CA275: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==498920== ==498920== Open file descriptor 8: /dev/shm/open_mpi.0000 ==498920== at 0xF0FABCC: __open_nocancel (open64_nocancel.c:39) ==498920== by 0xF07EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==498920== by 0xE48C822: ??? ==498920== by 0xE48C96F: ??? ==498920== by 0x141D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==498920== by 0x141D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==498920== by 0x14186922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==498920== by 0x1412B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==498920== by 0x10D51418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==498920== by 0x10CEAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==498920== by 0xF9E1D38: PetscInitialize (pinit.c:924) ==498920== by 0xE457FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==498920== by 0xE45801D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==498920== by 0x1D25F2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==498920== by 0x1CBF89: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==498920== by 0x1CF724: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==498920== by 0x1CF5C4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==498920== by 0x1CFC5B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==498920== by 0x1CA275: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==498920== ==498920== Open file descriptor 115: ==498920== ==498920== ==498920== Open file descriptor 111: ==498920== ==498920== ==498920== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithCaBasedCellPopulation_valgrind.txt ==498920== ==498920== ==498920== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==498920== ==498920== ==498920== ==498920== HEAP SUMMARY: ==498920== in use at exit: 700,686 bytes in 9,374 blocks ==498920== total heap usage: 7,097,290 allocs, 7,087,916 frees, 8,098,998,496 bytes allocated ==498920== ==498920== LEAK SUMMARY: ==498920== definitely lost: 0 bytes in 0 blocks ==498920== indirectly lost: 0 bytes in 0 blocks ==498920== possibly lost: 0 bytes in 0 blocks ==498920== still reachable: 56 bytes in 3 blocks ==498920== suppressed: 700,630 bytes in 9,371 blocks ==498920== Reachable blocks (those to which a pointer was found) are not shown. ==498920== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==498920== ==498920== For lists of detected and suppressed errors, rerun with: -s ==498920== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)