==498161== Memcheck, a memory error detector ==498161== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==498161== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==498161== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPeriodicNodeBasedCellPopulationParallelMethods -malloc_debug -malloc_dump -memory_info ==498161== Parent PID: 496422 ==498161== ==498161== ==498161== FILE DESCRIPTORS: 9 open (3 std) at exit. ==498161== Open file descriptor 12: ==498161== at 0xEC3622D: pipe (pipe.c:29) ==498161== by 0x18A0507D: ??? ==498161== by 0x140084CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==498161== by 0x108D5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==498161== by 0x1086ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==498161== by 0xF565D38: PetscInitialize (pinit.c:924) ==498161== by 0xE457FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==498161== by 0xE45801D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==498161== by 0x12B4EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==498161== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==498161== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==498161== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==498161== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==498161== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==498161== ==498161== Open file descriptor 8: /dev/shm/open_mpi.0000 ==498161== at 0xEC3ABCC: __open_nocancel (open64_nocancel.c:39) ==498161== by 0xEBBEC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==498161== by 0xE48C822: ??? ==498161== by 0xE48C96F: ??? ==498161== by 0x140AD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==498161== by 0x140AD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==498161== by 0x14063922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==498161== by 0x140082DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==498161== by 0x108D5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==498161== by 0x1086ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==498161== by 0xF565D38: PetscInitialize (pinit.c:924) ==498161== by 0xE457FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==498161== by 0xE45801D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==498161== by 0x12B4EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==498161== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==498161== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==498161== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==498161== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==498161== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==498161== ==498161== Open file descriptor 115: ==498161== ==498161== ==498161== Open file descriptor 111: ==498161== ==498161== ==498161== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPeriodicNodeBasedCellPopulationParallelMethods_valgrind.txt ==498161== ==498161== ==498161== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==498161== ==498161== ==498161== ==498161== HEAP SUMMARY: ==498161== in use at exit: 700,754 bytes in 9,378 blocks ==498161== total heap usage: 54,824 allocs, 45,446 frees, 1,353,937,030 bytes allocated ==498161== ==498161== LEAK SUMMARY: ==498161== definitely lost: 0 bytes in 0 blocks ==498161== indirectly lost: 0 bytes in 0 blocks ==498161== possibly lost: 0 bytes in 0 blocks ==498161== still reachable: 56 bytes in 3 blocks ==498161== suppressed: 700,698 bytes in 9,375 blocks ==498161== Reachable blocks (those to which a pointer was found) are not shown. ==498161== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==498161== ==498161== For lists of detected and suppressed errors, rerun with: -s ==498161== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)