==512468== Memcheck, a memory error detector ==512468== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==512468== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==512468== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningCryptSimulationsWithMutationsTutorial -malloc_debug -malloc_dump -memory_info ==512468== Parent PID: 496422 ==512468== ==512468== ==512468== FILE DESCRIPTORS: 9 open (3 std) at exit. ==512468== Open file descriptor 12: ==512468== at 0x118C622D: pipe (pipe.c:29) ==512468== by 0x1A6C507D: ??? ==512468== by 0x1582B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==512468== by 0x111D0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==512468== by 0x11169D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==512468== by 0xFE40D38: PetscInitialize (pinit.c:924) ==512468== by 0xFD17FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==512468== by 0xFD1801D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==512468== by 0x123E71: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==512468== by 0x11F753: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==512468== by 0x1219BC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==512468== by 0x1218B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==512468== by 0x121ECB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==512468== by 0x11DF55: main (TestRunningCryptSimulationsWithMutationsTutorial.cpp:18) ==512468== ==512468== Open file descriptor 8: /dev/shm/open_mpi.0000 ==512468== at 0x118CABCC: __open_nocancel (open64_nocancel.c:39) ==512468== by 0x1184EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==512468== by 0x110CA822: ??? ==512468== by 0x110CA96F: ??? ==512468== by 0x158D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==512468== by 0x158D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==512468== by 0x15886922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==512468== by 0x1582B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==512468== by 0x111D0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==512468== by 0x11169D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==512468== by 0xFE40D38: PetscInitialize (pinit.c:924) ==512468== by 0xFD17FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==512468== by 0xFD1801D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==512468== by 0x123E71: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==512468== by 0x11F753: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==512468== by 0x1219BC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==512468== by 0x1218B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==512468== by 0x121ECB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==512468== by 0x11DF55: main (TestRunningCryptSimulationsWithMutationsTutorial.cpp:18) ==512468== ==512468== Open file descriptor 115: ==512468== ==512468== ==512468== Open file descriptor 111: ==512468== ==512468== ==512468== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningCryptSimulationsWithMutationsTutorial_valgrind.txt ==512468== ==512468== ==512468== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==512468== ==512468== ==512468== ==512468== HEAP SUMMARY: ==512468== in use at exit: 700,702 bytes in 9,374 blocks ==512468== total heap usage: 16,187,971 allocs, 16,178,597 frees, 2,845,002,497 bytes allocated ==512468== ==512468== LEAK SUMMARY: ==512468== definitely lost: 0 bytes in 0 blocks ==512468== indirectly lost: 0 bytes in 0 blocks ==512468== possibly lost: 0 bytes in 0 blocks ==512468== still reachable: 56 bytes in 3 blocks ==512468== suppressed: 700,646 bytes in 9,371 blocks ==512468== Reachable blocks (those to which a pointer was found) are not shown. ==512468== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==512468== ==512468== For lists of detected and suppressed errors, rerun with: -s ==512468== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)