==511929== Memcheck, a memory error detector ==511929== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==511929== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==511929== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningVertexBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==511929== Parent PID: 496422 ==511929== ==511929== ==511929== FILE DESCRIPTORS: 9 open (3 std) at exit. ==511929== Open file descriptor 12: ==511929== at 0x100ED22D: pipe (pipe.c:29) ==511929== by 0x18A0507D: ??? ==511929== by 0x13F684CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==511929== by 0xF910418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==511929== by 0xF8A9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==511929== by 0xE580D38: PetscInitialize (pinit.c:924) ==511929== by 0xE457FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==511929== by 0xE45801D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==511929== by 0x129A1D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==511929== by 0x124BC5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==511929== by 0x127242: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==511929== by 0x1270E2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==511929== by 0x127779: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==511929== by 0x122EF5: main (TestRunningVertexBasedSimulationsTutorial.cpp:19) ==511929== ==511929== Open file descriptor 8: /dev/shm/open_mpi.0000 ==511929== at 0x100F1BCC: __open_nocancel (open64_nocancel.c:39) ==511929== by 0x10075C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==511929== by 0xF80A822: ??? ==511929== by 0xF80A96F: ??? ==511929== by 0x1400D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==511929== by 0x1400D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==511929== by 0x13FC3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==511929== by 0x13F682DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==511929== by 0xF910418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==511929== by 0xF8A9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==511929== by 0xE580D38: PetscInitialize (pinit.c:924) ==511929== by 0xE457FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==511929== by 0xE45801D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==511929== by 0x129A1D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==511929== by 0x124BC5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==511929== by 0x127242: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==511929== by 0x1270E2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==511929== by 0x127779: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==511929== by 0x122EF5: main (TestRunningVertexBasedSimulationsTutorial.cpp:19) ==511929== ==511929== Open file descriptor 115: ==511929== ==511929== ==511929== Open file descriptor 111: ==511929== ==511929== ==511929== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningVertexBasedSimulationsTutorial_valgrind.txt ==511929== ==511929== ==511929== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==511929== ==511929== ==511929== ==511929== HEAP SUMMARY: ==511929== in use at exit: 700,754 bytes in 9,378 blocks ==511929== total heap usage: 1,401,125 allocs, 1,391,747 frees, 1,413,584,123 bytes allocated ==511929== ==511929== LEAK SUMMARY: ==511929== definitely lost: 0 bytes in 0 blocks ==511929== indirectly lost: 0 bytes in 0 blocks ==511929== possibly lost: 0 bytes in 0 blocks ==511929== still reachable: 56 bytes in 3 blocks ==511929== suppressed: 700,698 bytes in 9,375 blocks ==511929== Reachable blocks (those to which a pointer was found) are not shown. ==511929== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==511929== ==511929== For lists of detected and suppressed errors, rerun with: -s ==511929== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)